Gene PSPTO_4953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4953 
SymbolmotA-2 
ID1186638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5613150 
End bp5614001 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content58% 
IMG OID637396274 
Productchemotaxis motA protein 
Protein accessionNP_794686 
Protein GI28872067 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA TTATCGGCAT CATTGTCGTT ATCGCGAGTG TCCTCGGCGG ATACGTACTG 
TCCCATGGCA AGATCATGGC GCTGTTCCAG CCCTACGAGG TCTTGATCAT CGGCGGTGCA
GCACTGGGCG CGTTCCTCCA GGCCAACCCT GGCTACATGT TCATGCACGT GTTCAAGAAG
TCGCTGAAGA TGTTCGGTAC GCGCTTCACA CACGCCTATT ACCTCGAAGT GCTGGGGTTG
GTCTACGAAA TCCTCAACAA GAGCCGCCGT GAAGGCATGA TGGCGATTGA AGGAGATATC
GAAGACGCGG CCTCCAGCCC GATCTTCGCC AAGTACCCCG GTGTGCTTAA AGATGAACGC
ATGACTGCGT ACATCTGCGA CTACCTGCGC ATCATGTCGT CCGGCAACAT GGCTCCCCAC
GAGCTGGAAG GCCTGTTCGA CATGGAACTG CTGAGCATGA AAGAAGATCT TGAGCATCCA
TCCCACGCCA TTACCGGTAT CGCCGACGGT ATGCCCGGCT TCGGCATCGT GGCTGCGGTA
CTGGGTATTG TGGTGACAAT GGCGTCGCTG GGTTCGGGCG ACAAGGCTGC GATCGGTATG
CACGTAGGTG CGGCGCTGGT CGGTACGTTC TTCGGTATTC TCGCGGCTTA CGGTTTCTTC
GGCCCTCTGG CCACCAGCCT TGCGCACGAC GCCAAAGAAG AAATGAACGT CTATGAGAGC
ATCAAGGCGT CGCTGGTGGC TTCAGCCTCC GGCATGCCGC CTTCGCTGGC CGTCGAGTTT
GGCCGCAAGG TTCTCTATCC GCTGCATCGC CCCAGCTTCA GCGAGCTGGA ACAAGCGGTT
CGCGGTCGCT AA
 
Protein sequence
MAKIIGIIVV IASVLGGYVL SHGKIMALFQ PYEVLIIGGA ALGAFLQANP GYMFMHVFKK 
SLKMFGTRFT HAYYLEVLGL VYEILNKSRR EGMMAIEGDI EDAASSPIFA KYPGVLKDER
MTAYICDYLR IMSSGNMAPH ELEGLFDMEL LSMKEDLEHP SHAITGIADG MPGFGIVAAV
LGIVVTMASL GSGDKAAIGM HVGAALVGTF FGILAAYGFF GPLATSLAHD AKEEMNVYES
IKASLVASAS GMPPSLAVEF GRKVLYPLHR PSFSELEQAV RGR