| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4888 |
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| Symbol | |
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| ID | 1186571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5539300 |
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| End bp | 5540160 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396208 |
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| Product | branched-chain amino acid ABC transporter, ATP-binding protein |
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| Protein accession | NP_794622 |
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| Protein GI | 28872003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA CTCCGACGCC CTCGTTCATG CTTGAGCCGA TTCTGGCCCC CAACTCCGAC
GCAGGCACCA GCCGCGACGC GGTAGGCCTT GGCAAAAGTG CTGGCAAAGG GCTGAACACG
CGGCATGGCA CGATCCTGAC CCTTGAAGAC ATCAGCGTCA GCTTCGACGG TTTCAAGGCG
CTAAATGATC TGAACCTGTA CATCGGCGTG GGCGAGCTGC GCTGCATCAT CGGCCCCAAC
GGCGCGGGCA AGACCACGCT GATGGACGTC ATTACCGGCA AGACCCGGCC AAGCCACGGC
AAAGCGTGGT TCGGCGAAAC ACTGGACCTG ACGCAGATGA GCGAGGTGCA GATTGCCCAG
TCCGGGATTG GCCGCAAATT CCAGAAGCCC ACGGTATTCG AAGCCCTGAG CGTGTTCGAA
AACCTGGAGC TGGCGCAGAA GACCGACAAG TCAGTATGGG CCAGCCTGCG TGCACGCTTG
ACAGGCGAGC AACAGGACCG AATCAGCGAA GTGCTGGAAA CCATCCGCCT GACCCCCTCG
ATGCATCGCC CGGCGGGCTT GTTGTCCCAC GGTCAGAAGC AGTTTCTGGA AATCGGCATG
TTGCTGGTCC AGGACCCGCA ACTTTTGCTG CTCGATGAGC CGGTGGCAGG CATGACCGAC
GCCGAAACCG AATTCACCGC CGAACTGTTC AAGAGCCTGG CGGGCAAACA CTCGTTGATG
GTGGTGGAGC ACGACATGGG CTTCGTCGGC TCGATTGCCG ACCACGTCAC CGTGCTGCAT
CAGGGCAGCG TACTGGCCGA AGGCTCACTG AACGACGTAC AGGCTGACGA ACGCGTGATT
GAAGTGTATT TAGGGCGCTA G
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| Protein sequence | MKTTPTPSFM LEPILAPNSD AGTSRDAVGL GKSAGKGLNT RHGTILTLED ISVSFDGFKA
LNDLNLYIGV GELRCIIGPN GAGKTTLMDV ITGKTRPSHG KAWFGETLDL TQMSEVQIAQ
SGIGRKFQKP TVFEALSVFE NLELAQKTDK SVWASLRARL TGEQQDRISE VLETIRLTPS
MHRPAGLLSH GQKQFLEIGM LLVQDPQLLL LDEPVAGMTD AETEFTAELF KSLAGKHSLM
VVEHDMGFVG SIADHVTVLH QGSVLAEGSL NDVQADERVI EVYLGR
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