Gene PSPTO_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4881 
Symbol 
ID1186564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5528813 
End bp5529274 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content59% 
IMG OID637396201 
Producthypothetical protein 
Protein accessionNP_794615 
Protein GI28871996 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAA AAGCACTCCT GCTGGCCGCA TTTTTGCTGC CGGCCTGCTT CGCCCAGGCC 
CATGAGTACA AGGCAGGGTC GCTGCTGATT GGCCATCCGT GGTCGATGGA GTTGCCGCCC
AATGCGCCCA CAGTGGCGGC GTATTTCATT ATCGAGAACA AAGGCGACAG CGACGACCGG
CTGATCGGTG TCGACACGCC CATCGCCGGG CAGGCGCAAT TGCATGAGCA TGTACACGCC
GACGGGCTGA TGAAGATGCA GCATGTTGAG GCGGTCGATA TTCCGGCAGG GGCAAAAGTG
AGTTTCGCGC CGATGGCCTG GCATGTGATG CTGCTGGACC TCAAGGATCG CTCGAAACTG
AGGGTCGGCC AGCGCTTCCC GATGACCCTG CATTTTGAAA AGGCAGGCGA TGTAGAGGTG
CAGGTCGTGG TACAAAAGCA GGCTCCGGAA CACCAGCACT GA
 
Protein sequence
MLKKALLLAA FLLPACFAQA HEYKAGSLLI GHPWSMELPP NAPTVAAYFI IENKGDSDDR 
LIGVDTPIAG QAQLHEHVHA DGLMKMQHVE AVDIPAGAKV SFAPMAWHVM LLDLKDRSKL
RVGQRFPMTL HFEKAGDVEV QVVVQKQAPE HQH