| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4855 |
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| Symbol | |
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| ID | 1186538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5500569 |
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| End bp | 5501453 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396175 |
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| Product | hypothetical protein |
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| Protein accession | NP_794589 |
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| Protein GI | 28871970 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGG TACTGGGCAC GTTTATGTTT GCTGCGGCGG TCTTTCTGTT GTTGTCCGGC
ATGGCTCGCC AGCGCCGCAA CGAACGCCTG GTGGCACAAC GGCTGAGGGG ACAGGTGGTT
CGTGAAAGCC GCATCGGCAG CCTGTTGCGA CTGCTCGGCG ATACCCGCAT CGGTCAGCGC
AGCATCAGTC TGGACTCGGA AACCCAAGTG CTGCTGAACC GCATCGGCTG GCGGCGTGCC
ACCAAACGCT CGCTGTTTGC CGCATGCCAG GTGGGTGTGC CCATCGCCCT GATGAGCATG
GTCATTCTGG CCCAAGTGCT GTTTTTCAAG GATATCGAGC AACCCTTCAT CGCACCGATA
TTCGCACTGG GCATCGGCTA TCTGCTGCCC AAACGGGTGC TGGCCGCCGC CGCTCAACGC
CGCCAGAAAA AAGTGGTGGT GGAAATCTCC ACGTTTATCC CGCTGCTGCG CATCCTGTTC
GAGTCGGGCA TGGCAGTGGA GCAGGCGTTG CGGGTCCTGA GCAATGAAGG CAAAGACCTG
CTGCCGGTGC TGTCCGATGA AATTCGCGTG GTATTGACCC GCGTCGACTC CGGCCTGGAG
CTGGGCGAAG AACTGCGCAA AACCGCCGCC CTGCTGGCCG TAGACGAGCT GAGCGACACC
TGCGTGATCC TCAACCAGCT CATCCATCAA GGCGGCGGCG CATTGAAGTC CCTGCTGACG
CTCAAGCAAC TGATCGACGA CCGACGCCTT ACCCGCCTGC AGGAGTACAT TTCCAAACTG
TCGGCCAAAA TGTCGGTGGT GATGATGGTG TTTCTGTTCC CGGCTCTGCT GATCGTGCTG
GCAGGCCCCG GGTTTATTGC CATAAGTCGG GCGCTGGGCA GTTAG
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| Protein sequence | MELVLGTFMF AAAVFLLLSG MARQRRNERL VAQRLRGQVV RESRIGSLLR LLGDTRIGQR
SISLDSETQV LLNRIGWRRA TKRSLFAACQ VGVPIALMSM VILAQVLFFK DIEQPFIAPI
FALGIGYLLP KRVLAAAAQR RQKKVVVEIS TFIPLLRILF ESGMAVEQAL RVLSNEGKDL
LPVLSDEIRV VLTRVDSGLE LGEELRKTAA LLAVDELSDT CVILNQLIHQ GGGALKSLLT
LKQLIDDRRL TRLQEYISKL SAKMSVVMMV FLFPALLIVL AGPGFIAISR ALGS
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