| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4852 |
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| Symbol | |
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| ID | 1186535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5497215 |
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| End bp | 5498405 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396172 |
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| Product | hypothetical protein |
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| Protein accession | NP_794586 |
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| Protein GI | 28871967 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA GCCTGAGCCA GACGTTCCTG GCAATTACCC GCAACACTAC CGATCTGGAA
TGGCTGCAGA GTGCCCTCGG CTCATTGGGC CAGGTGGTCA GCGCAGGCAC CGGCAGCCTC
GACGACCTGC TGGCGTTGGT GGATGTGACA TTTGCCAGCG TGGTGTTCGT CGGGCTGGAC
CGTGAGCATT TGATGACCCA GAGCGCCCTG ATCGAGAGTG CGCTGGAGGC CAAACCGATG
CTGGCCATCG TTGCGCTCGG CGACGGCATG GATAACCAGT TGGTGCTCAA CGCCATGCGT
GCCGGAGCCC GGGATTTCGT CGCCTACGGC TCTCGCTCCA GCGAGGTCGC CGGCCTGGTC
AGACGCCTGA GCAAGCGCCT GCCCGCCGTG ACGCCCAACC CGAACATGAG CGGGCTGTCG
GTGCTGTATG GCGCGCAAAA CGATGGCGAC GGCGCCTTGA TCGCGACCCA TCTGGCACTG
GTGGTGCACA AGACCGGGCA ACGCACACTG CTGCTGGACC TGGGCCTGCC ACGCGGCGAT
AGCCTGTTGA TGCTCGGCCT TGAATCCTCG TTCAGCTTCG GCGATGCGCT GCGCCACTTG
CGCAGGCTCG ATGCAACGTT GATCGACAGC GCATTCACCA CCAGCGAAAG CGGCCTGCGC
ATTCTGGCCT ACACCGAAGC CGACGATCAT CTGGAGCAGT CCAGCGCAGC CGAGCTGTAC
ATGCTGCTCA GCGCGCTGCG TCAGCACTTT CAGCATGTGA TCGTGAACCT GGTGGGGCAG
CCGGACAGTG AAGCACTGCG TTCGCTGGTC AGCCATTGTG ATCAGTTGCT GTGGTACACC
GACCAGAGCG TGCTGGGGTG CCGGCGCAAC CTGACCGTGC TCAGCAATTG GCGCGAGAAA
GGCATGAAAA TGCAGCACGC CGGCCTGTTG CTCGACCGCT ATCTGCGCTC GGTGGCGCCC
AATTCGGAAA CCCTGGGCAA GACCTTCGGC CTGCCGGTGC TCTCGGTGCT GCCGCTCGCT
GCGGAGTTGC GCCTCAATGC CAAGAATCAG GGCGTGACGC TGTTTGAACT GGCATCGCGT
GACGCGCTGT GTTCCGGGCT GCGGCGTCTT GGCGAACACC TGGCGCGGCA CTCCGAAACG
CATGAAAAAT CCGATCAAGG CTGGCTCGCC CGGCTGTGGG GGAACAGGTA A
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| Protein sequence | MSQSLSQTFL AITRNTTDLE WLQSALGSLG QVVSAGTGSL DDLLALVDVT FASVVFVGLD
REHLMTQSAL IESALEAKPM LAIVALGDGM DNQLVLNAMR AGARDFVAYG SRSSEVAGLV
RRLSKRLPAV TPNPNMSGLS VLYGAQNDGD GALIATHLAL VVHKTGQRTL LLDLGLPRGD
SLLMLGLESS FSFGDALRHL RRLDATLIDS AFTTSESGLR ILAYTEADDH LEQSSAAELY
MLLSALRQHF QHVIVNLVGQ PDSEALRSLV SHCDQLLWYT DQSVLGCRRN LTVLSNWREK
GMKMQHAGLL LDRYLRSVAP NSETLGKTFG LPVLSVLPLA AELRLNAKNQ GVTLFELASR
DALCSGLRRL GEHLARHSET HEKSDQGWLA RLWGNR
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