Gene PSPTO_4779 details

Gene Information

• Locus tag: PSPTO_4779
• ID: 1186462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5419777
• End bp: 5420472
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637396100
• Product: hypothetical protein
• Protein accession: NP_794514
• Protein GI: 28871895
• COG category: [R] General function prediction only
• COG ID: [COG2384] Predicted SAM-dependent methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.526815
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACGAAC AGAGATTGTC CATGCGCCTT GAGCGTGTGG CGACGCACGT GCCCGCCGGT 
GCGCGACTGG CCGATATCGG CTCGGATCAC GGCTACCTGC CGGTGGCGCT GCTGAACCGT 
GGCGCCGTCT CGGCGGCGGT GGCGGGCGAA GTAGCGTTGA CGCCGTTCTA CGCGGCCGAA 
CGTACCGTGC GCGAGAACGA TCTGGATCAG CAGATCAGCG TGCGTCTGGC CGATGGGTTG 
GCGGCGATAG AACCGACTGA CAGGATCACT GCAATCAGTC TTTGCGGCAT GGGCGGCGAG 
ACAATCCGCG ACATTCTTGA AAGCGGCAAG GCGCGGTTGA GTGGTCAGGA GCGGCTGATT 
CTGCAACCCA ACGGTGGCGA GCAGCCATTG CGCGTGTGGC TGATGGAACA TAACTACCGC 
ATCCTTGACG AGGAAGTGCT GCGAGAGAAC CGCTTCGACT ACGAAATCAT CGTCGCCGAG 
CGGACCGGCC CGATGATCTA CACCGCCGAA CAGCTGTATT TCGGCCCCAT ACAGATGCAG 
ACGCGCAGCC CGGCTTTTTT GCTCAAGTGG CAGCGCCTGC TGGGCAAAAA ACACAAGGCC 
CTGAGCAATT TCGCCCGCGC CCGGAAGGCT GTGCCTGAAG AGAAAATGCA GGACCTTGCG 
CAGCAGATCC GCTGGATTAC CGCGTTGCTG AATTAA 

 

Protein sequence

MNEQRLSMRL ERVATHVPAG ARLADIGSDH GYLPVALLNR GAVSAAVAGE VALTPFYAAE 
RTVRENDLDQ QISVRLADGL AAIEPTDRIT AISLCGMGGE TIRDILESGK ARLSGQERLI 
LQPNGGEQPL RVWLMEHNYR ILDEEVLREN RFDYEIIVAE RTGPMIYTAE QLYFGPIQMQ 
TRSPAFLLKW QRLLGKKHKA LSNFARARKA VPEEKMQDLA QQIRWITALL N