Gene PSPTO_4635 details

Gene Information

• Locus tag: PSPTO_4635
• ID: 1186318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5238570
• End bp: 5239139
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637395972
• Product: hypothetical protein
• Protein accession: NP_794386
• Protein GI: 28871767
• COG category: [S] Function unknown
• COG ID: [COG2949] Uncharacterized membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.940029
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACGA TTTACCTCAC CCTACTTTCG CTTGGCACGC TTTTTATCCT GTCGGCAAGC 
CTCCTCGTCA TTGATGGAGT ATCTGATACA GCCAAGACCA GCGATGTCGC CATTGTTCTT 
GGTTCAAAAG TCACGCCAGA CGGCGTTCCG TCCGCACGCC TGCAAGCCCG GCTTGATCGC 
GCAGTGGAGC TTTACCGGCA AGGACGGGTC AGGAACATCA TCGTGAGTGG AGGCACCGGC 
GTGGAGGGTT TCAGCGAAGC CGTCGGCATG GCCAACTACC TTGCGGAGCG CTCAGGGCTG 
CCGCGTGAAG CGATTCTGCT TGATGAGCAG GGCAACACCA CGAAAGACAC GGCCCGCAAC 
AGCGCTCAGA TCATGAAACA GCGCGGCTTC AAAAGTGCTG TTGTGGTGAC GCAATACTTC 
CACATCACCC GAAGTCGGTA TGCCCTGTAT CAGGCGGGCG TTACCCAGGT ATCGACGGCA 
CATGCCCGAT ATTTCGAATG GCGCGACCTG TATTCACTTG CGCGGGAAGT TGCAGCGCTG 
CCCGCCTATT GGTGGGCTGA AAATACCTGA 

 

Protein sequence

MKTIYLTLLS LGTLFILSAS LLVIDGVSDT AKTSDVAIVL GSKVTPDGVP SARLQARLDR 
AVELYRQGRV RNIIVSGGTG VEGFSEAVGM ANYLAERSGL PREAILLDEQ GNTTKDTARN 
SAQIMKQRGF KSAVVVTQYF HITRSRYALY QAGVTQVSTA HARYFEWRDL YSLAREVAAL 
PAYWWAENT