| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4367 |
|---|
| Symbol | |
|---|
| ID | 1186048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4929853 |
|---|
| End bp | 4931280 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637395708 |
|---|
| Product | lipoprotein, putative |
|---|
| Protein accession | NP_794122 |
|---|
| Protein GI | 28871503 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3488] Predicted thiol oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGC GGTTCCGCCT GTCCCTTGCT CTGCTCACGA CGCTGGTCTT GAGCGCGTGC
GATGACGCCC CGCGCTTCAC TCATGCCGAG CCGGGCGAAG CCTTGTCTGG CGGCAGCGCG
ACGGTCAGGA AGAGCGATCA GAACGCGTTC TCAATGCCCT CGGCCAATCT GTCGCCGGTG
CGTCGGCTGG ATTTCAGTGT CGGCAACAGT TTCTTTCGCA GCCCGTGGGT GATTGCGCCG
TCGACCACCA CGGCCCGCGA TGGGCTCGGG CCGCTGTTCA ACACCAATGC CTGTCAGAAC
TGCCACATCA AGGACGGTCG CGGTCATCCG CCGGAGGCTG GCGATAGTAA TGCGGTGTCG
ATGCTGGTCA GGCTGTCGAT TCCTGATGAC CCGGCCTACG CAGACCTGAT CCGGCGTAAT
GGGGTGTTGC CCGAGCCGAC CTATGGCGGG CAGTTGCAGG ACATGTCGAA TCCCGGCGTT
GCACCGGAAG GCAAGGTGCG GGTCGAGTAC GACGCGTTGA CGGTCAATTT CCGCGACGGC
ACTGCCGTCG AATTGCGTCA GCCAACGCTG AGGATCACCC AATTGGGCTA CGGCCCGATG
CACCCCGAAA CACATATCTC GGCGCGCATT GCCCCGCCAA TGATCGGTCT TGGGTTGCTC
GAAGCCATTG CGGATGACGC CATCCTCGCC AACGCCGATC CCGATGACAA GAACGCCGAT
GGCATCTCGG GCCGCCCCAA CTGGGTCTGG GACGATGTGC AGCAAAAAGT CGTCATGGGC
AGGTTCGGCT GGAAAGCCGG ACAGCCCAAC CTCAACCAGC AGAACGTGCA CGCCTTTTCC
GGCGACATGG GCCTGACCAC AAGCCTGCGC CGCGTCGATG ACTGCACACC GGCGCAGACC
GATTGCCTGG TAGCGCCCAA CGGCAATGGC CCGGACGGCG AACCAGAGGT CAGTGACAAC
ATCCTGCGTC TGGTCGAGTT TTACACCCGA AACCTGGGCG TTCCGGCTCG CCGAAAGGTA
GCTGATCCGC AGGTGCTGGC CGGCAAGAAT CTGTTTTTCG AGGCGGGTTG CCAACAGTGC
CACACGCCAT CGTTCAAAAC CCGGAGCGAC GCTGCGCAAC CCGAACTGGC CAACCAGGAC
ATTCGCCCCT ACAGCGACCT GTTGCTGCAC GACATGGGCG AAGGGCTGGC CGATAACCGT
ACCGAGTTCC AGGCCACCGG CCGCGAGTGG CGCACGCCGC CGCTGTGGGG GTTGGGCCTG
ACCGAAACGG TAAGCGGGCA TACCCAACTG CTGCATGACG GTCGCGCGCG CAACATGCTT
GAGGCGATAC TGTGGCACGG TGGCGAAGCC CAGGCAGCAC AACGACGAGT ATTGGCATTT
GACGCCGAAC AGCGTGAAGC GCTGTTGGCG TTTCTGAATT CGTTATGA
|
|---|
| Protein sequence | MSTRFRLSLA LLTTLVLSAC DDAPRFTHAE PGEALSGGSA TVRKSDQNAF SMPSANLSPV
RRLDFSVGNS FFRSPWVIAP STTTARDGLG PLFNTNACQN CHIKDGRGHP PEAGDSNAVS
MLVRLSIPDD PAYADLIRRN GVLPEPTYGG QLQDMSNPGV APEGKVRVEY DALTVNFRDG
TAVELRQPTL RITQLGYGPM HPETHISARI APPMIGLGLL EAIADDAILA NADPDDKNAD
GISGRPNWVW DDVQQKVVMG RFGWKAGQPN LNQQNVHAFS GDMGLTTSLR RVDDCTPAQT
DCLVAPNGNG PDGEPEVSDN ILRLVEFYTR NLGVPARRKV ADPQVLAGKN LFFEAGCQQC
HTPSFKTRSD AAQPELANQD IRPYSDLLLH DMGEGLADNR TEFQATGREW RTPPLWGLGL
TETVSGHTQL LHDGRARNML EAILWHGGEA QAAQRRVLAF DAEQREALLA FLNSL
|
|---|
| |