| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4308 |
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| Symbol | catJ |
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| ID | 1185989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4858990 |
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| End bp | 4859769 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395650 |
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| Product | 3-oxoadipate:succinyl-CoA transferase, subunit B |
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| Protein accession | NP_794064 |
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| Protein GI | 28871445 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTACT CCACCAGTGA GATGATGACC GTCGCCGCTG CCCGTCGTCT GCGTAACGGT
TCAGTGTGTT TTGTCGGGAT CGGCCTGCCA TCCAAGGCGG CGAACCTGGC GCGTCTGACG
TCGTCGCCGG ATGTGGTGCT GATCTACGAA TCCGGCCCCA TCGGCGCCAA ACCCACTGTA
TTGCCACTGT CGATCGGTGA CGGCGAGCTG GCGGAAACCG CTGACACCGT GGTGTCCACC
AGCGAAATCT TTCGTTATTG GCTGCAGGGC GGCCGGGTTG ATGTCGGCTT TCTCGGTGCG
GCGCAAGTGG ATCGCTTCGG CAACATCAAC ACCACCGTGG TAGGCGACTA TCACAACCCC
AAAGTTCGTT TGCCTGGTGC CGGTGGCGCG CCGGAGATTG CCGGTTCGGC CAAGTCGGTG
CTGATCATTC TCAAGCAGTC GGCGCGCTCG TTCGTCAACA AACTGGACTT CATCACCTCG
GTCGGTCACG GCGAAGGCGG TGACTCACGC AAGCGTCTGG GCCTGCCCGG CGCGGGCCCG
GTGGGTATCA TTACCGACCT GTGCATCATG GAGCCGGAAG CAGACACCCA CGAGTTTGTC
GTGACCACGC TGCACCCCGG CGTGACCCGC GAGCAGGTGA TCGCGGCCAC CGGTTGGGAA
ATCCGTTTTG CCGAAAACGT AGCGGTCTCT GCAGAGCCCA CTGACGTGGA GCTGACCGCG
CTGCGTGATC TGGAAGCCCG TACCGCTGCC GCACATGGCC AGGTGGCAGG AGAAGCATGA
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| Protein sequence | MTYSTSEMMT VAAARRLRNG SVCFVGIGLP SKAANLARLT SSPDVVLIYE SGPIGAKPTV
LPLSIGDGEL AETADTVVST SEIFRYWLQG GRVDVGFLGA AQVDRFGNIN TTVVGDYHNP
KVRLPGAGGA PEIAGSAKSV LIILKQSARS FVNKLDFITS VGHGEGGDSR KRLGLPGAGP
VGIITDLCIM EPEADTHEFV VTTLHPGVTR EQVIAATGWE IRFAENVAVS AEPTDVELTA
LRDLEARTAA AHGQVAGEA
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