Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4204 |
Symbol | |
ID | 1185884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4735471 |
End bp | 4736799 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637395550 |
Product | amidase family protein |
Protein accession | NP_793965 |
Protein GI | 28871346 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAG CGTTTGCACA GGGGCTCAGT GACCCGTTGC AGGTTCTGGA AGACGCCCTG CAACAGGCGA CACAGGTCGA TCATGTGTTC ATCTCCATGA GTGTCGAACG TGCCCGCAGG GAAGCCGAAG CTTCCGCGGC CCGCTGGAAG CACGGACAGC CGCTTAGCCC GTTCGACGGC GTGCCGGTCG CCTGGAAAGA CCTGTTCGAT GTCGCCGGTT GCGTCACGAC CGCGGGCGCT ACGGTGCGCA ACAACCTGTC GCCAGCCTTG CTGGATGCGC CGAGCGTTGG GCTGCTGGCG CGTGCTGGCA TGGTCAGCCT GGGCAAGACC AACCTCAGCG AATTTGCCTA TTCCGGGTTG GGCCTGAATC CGCATTTCGG CACGCCGATC AACCCGATGA GCGATGGCTC GCCGCGCATT CCCGGCGGGT CTTCTTCGGG GTCGGCGGTG GCGGTGGCTG CCGGGATCGT GCCGATTGCG ATGGGCACCG ACACTGCGGG CTCTATCCGC ATTCCTGCCG CTTTCAATAG TCTGGTCGGT TTTCGCAGTA CCAGCCGCCG TTACAGTCGC GACGGCGTGT TCCCGCTGGC GCTGACTCTG GACAGCGTCG GCCCGCTGAC CCGTAGCGTG CGCGATGCGC TGGTGATCGA CGACCTGCTT TGCGCGCGCA GCAAACCCAC TTCACTGCTA CCCCGCAGCC TTGCCGGTCA GCGTTTTCTG GTCGATCGGG CCGTGCTGGA AGATGAGCGC GTTGCGCCTG CCGTTCGCGA CAACCTGTTG CGCGCCGTCG AGGCTTTGCG GGCCGGCGGT GCGTTGATCG AGATGGGCCA CTGCCAGGCC TTTCAGGCCA CCTTGCAAGT GATCCAGCAG CACGGCTGGC TGGGTGCTGC CGAGGCCTTC GCACTGCATC AGTCGTTGCT CGACAGCGAC GCCGCCAGCC AGCTCGACCC TCGGGTTCGC AAGCGTCTGG AGGCCGCGCG CCACATGCCT GCCAGCTTGC TGGTCAATCT GTACGCCGCG CGGGAACGCT TGCAGGAGCA GTTGACCCTC GAACTTGATG GCGCGCTGCT GATCACCCCA AGCGTTGCCC ACGTTGCGCC GCCGCTCGCG CCGCTGTTGA ACGACGAAGA ACTGTTCATT CAGACCAACC TCGCCACGCT GCGCCTGACC ATGCCCGGCA GCCTGCTGAA CATGCCCGGC GTGTCGCTGC CCAGCGGCTG CGATGCCTCG GGCCTGCCCA CCGGGCTGCT GCTCAGCGCT CCGGCGGGAG AGGACGCGCG CCTGTTGCGC GCGGCCCTGA CGGTGGAGTC GTTGCTCAAC CAACCTTGA
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Protein sequence | MAEAFAQGLS DPLQVLEDAL QQATQVDHVF ISMSVERARR EAEASAARWK HGQPLSPFDG VPVAWKDLFD VAGCVTTAGA TVRNNLSPAL LDAPSVGLLA RAGMVSLGKT NLSEFAYSGL GLNPHFGTPI NPMSDGSPRI PGGSSSGSAV AVAAGIVPIA MGTDTAGSIR IPAAFNSLVG FRSTSRRYSR DGVFPLALTL DSVGPLTRSV RDALVIDDLL CARSKPTSLL PRSLAGQRFL VDRAVLEDER VAPAVRDNLL RAVEALRAGG ALIEMGHCQA FQATLQVIQQ HGWLGAAEAF ALHQSLLDSD AASQLDPRVR KRLEAARHMP ASLLVNLYAA RERLQEQLTL ELDGALLITP SVAHVAPPLA PLLNDEELFI QTNLATLRLT MPGSLLNMPG VSLPSGCDAS GLPTGLLLSA PAGEDARLLR AALTVESLLN QP
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