Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4192 |
Symbol | |
ID | 1185872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4723046 |
End bp | 4723645 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395538 |
Product | hypothetical protein |
Protein accession | NP_793953 |
Protein GI | 28871334 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACA TGCGTGAAGA TAAACATCCT CCCCATCACC GTCCGCCGCA CCTGCGCGAA GCAGGCGAAG ACCGCGACGG TTTTGAAAAA CGCCCGGGCC GTGAGCGCGG TGGACGCGGC CCGCGGGTCT TTGCTCCGGG CGATCTGAAA TTGCTGCTGT TGGCGCTGAT CGCCGAACAG CCGTCCCACG GCTACGACCT GATCCGCAAG ATCGAAGGCC TGTTCGACGG CGCGTATTGC CCAAGCCCAG GTGTTATCTA CCCGACCCTG ACCTTTCTTG AAGAAAGCGA GATGGTGCTC GGCGATGCCC AGGCAGGCAA AAAGCTCTAC ACCGTGACCG ATGCCGGTCG CAGCTCATTG CAGGATCAGG CCGTTGCGCT GGAAGGTGTA CGGATGCGCA TCGATGTCAG CAAGCGCTCG CTGCGCGGCC ATGATCGCCC GGCAGAAATT CATGAAGCCG TGCATAACCT TCGCCACGCG TTACAGATGC ATCACGGCCG CTGGACTCCG GAAGAAATCC TGCGGGTCAG CGAGTTGCTC AACACCACTG CCAAGGCCGT CGTCGATGGG CCTCAACCTG CATCGGAGGC TTCAGTATGA
|
Protein sequence | MKNMREDKHP PHHRPPHLRE AGEDRDGFEK RPGRERGGRG PRVFAPGDLK LLLLALIAEQ PSHGYDLIRK IEGLFDGAYC PSPGVIYPTL TFLEESEMVL GDAQAGKKLY TVTDAGRSSL QDQAVALEGV RMRIDVSKRS LRGHDRPAEI HEAVHNLRHA LQMHHGRWTP EEILRVSELL NTTAKAVVDG PQPASEASV
|
| |