| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4141 |
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| Symbol | |
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| ID | 1185821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4667817 |
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| End bp | 4670327 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395487 |
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| Product | helicase domain protein |
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| Protein accession | NP_793902 |
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| Protein GI | 28871283 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAC CCACTGATTT CGCTCGACGA TGGTTTCTCG CCCGAGGCTG GAAGCCGTTC
GCGTTTCAGA AGGAAGTCTG GGCGGCGGTG AAGAACGGCG AGTCCGGCCT GCTGCACGCC
AGCACCGGCT CCGGCAAGAC CTACGCTGTA TGGTTTGCCG CGCTCAACCG CTTCGCCAAC
GCCAACGCCA ACACCAACAC CAACACCCTC ACCGCTGACG ACAAGCCACG CAAACGCAAA
CCGCCCGCTG CACCGCTGAG TGTCCTGTGG ATCACGCCTA TGCGCGCGTT GGCTGCGGAT
ACGGCGCGTG CGCTTGAAGC GCCGTTGGCC GAGCTGGATA TTGCGTGGTC GGTGGGGTTG
CGTACCGGCG ATACCAGCGG CAGCGAGCGC GCTCGTCAGA GCCGACGCCT GCCCTCGGCA
CTGATCACTA CACCGGAAAG CCTGACCCTG CTGCTGACCC GCGCCGATGC ACAGGTCGCC
TTGTCAACGC TGAAAATGGT CGTGGTGGAC GAATGGCACG AGCTGATCGG TAACAAACGT
GGCGTGCAAC TGCAATTGGC TCTGGCTCGA CTGCGCCATT GGAACCCGCA ACTGATTGTG
TGGGGTATTT CCGCAACGCT GGGCAATCAG GAGCATGCGC AGCAGGTACT GATCGGCGAC
GGCGGCGTGA CCGTGCAGGG CAAGATCGTC AAGCAATTGC TGGTCGATAC GCTGTTGCCG
ACTGCCATCG AGCGCTTTCC GTGGGCCGGG CACATGGGCC TGCGCATGTT GCCGCAAGTG
GTCGCCGAGG TGCACAGCAG TGCCAGTTGC CTGGTGTTCA CCAATACCCG GGCGCAATCG
GAAATCTGGT ATCAGGCTCT GCTCGAAGCG CGCCCCGACT GGGCCGGGCT GATTGCCCTG
CATCATGGAT CGCTGGCCCG GGAAGTCCGT GACTGGGTCG AGCGCGCCTT GAAGGAAGGT
GTGCTCAAGG CCGTGGTGTG CACCTCAAGC CTGGACCTGG GCGTGGATTT CCTGCCCGTC
GAACGCGTAC TGCAAATCGG CTCACCCAAA GGCGTCGCCC GCCTGATGCA ACGCGCCGGG
CGTTCAGGCC ATGCGCCAGG CCGCCCTTCA CGCGTGACGC TGGTGCCCAC CCACAGCCTG
GAACTGGTCG AAGCCGCCGC CGCCCACGAT GCCGTGGCAG CCAGAATGAT CGAGCCGCGT
GAATCCCCCC ACCAGCCACT TGATGTGCTG GTGCAGCACC TGGTCAGCAT GGCGCTGGGC
GGCGGTTTTC TGCCCGACGA GCTGCTGGTG GAAGTGCGCA GCGCATGGGC CTACCGCGAC
CTCAGCGATG ACCAATGGCA ATGGGCGCTG GCGTTCGTGC GCAACGGCGG TCACTCGCTG
ACCGCTTACC CGGATTACCG CCGCGCCGAA CCGGACGAAC ACGGTGTCTG GCGTGTTCCC
GATGCGCGTC TGGCCCGTCG GCACCGCATG AGCGTCGGTA CCATCGTCAG TGAAGCCACC
GTCAACCTCA AATACTGGAA AAAAGGCGGC GGTGGCGGCT CGCTGGGCAG CGTGGAGGAA
GGCTTCATCG CCCGGCTCAA GCCCGGCGAC GGCTTTCTGT TCGGCGGGCG TTTGCTGGAG
TTGGTGCGGG TGGAAAACAT GACCGCCTAC GTCAAGCGTG CCACCGGCAA GAAAGCCGCC
GTGCCCCGCT GGAATGGTGG ACGAATGCCG TTGTCCAGCG AGCTGGCAAA CGCCGTGGTA
GAGCAATTCG ATGCCGCCGC ACGAGGTGAA TTCAATAGCC CGGAAATGCA GGCCATCAAG
CCGCTGCTGG AAGTGCAGCA GCAATGGTCG GGCCTGCCGC AACGCGACAC GCTGCTGGCC
GAAACGCTAA AATCCCGCGA AGGCTGGCAC CTGTTTCTTT ACCCGTTCGC TGGCCGCCAT
GTGCACCTGG GGCTGGGCAG CTTGCTGGCA TGGCGCCTTA GCCGCTATCA GCCGCTGACC
TTCTCGATCG CGGTCAACGA CTATGGTCTG GAGCTGCTCA GTGCCAGCGA GATTGACTGG
GCGCAAGCAT TGCAAGGCGA TCTTTTCAGC GAAACCGATC TACTGGCGGA CATTATCGCC
AGCCTGAACG CGGGCGAGCT GGCCTTGCGA CGCTTTCGTG AAATCGCCCG GATCTCGGGG
CTGGTGTTTT CCGGCTACCC GGGAGCGGCC AAGAGCAATC GTCAGCTTCA GGCATCCAGT
GGTTTGTTTT TTGAAGTATT CAAACAGTAC GACGCCGAGA ACATGCTGCT GACTCAAGCC
GAACAAGAGG TGTTGCGCCA GGAACTGGAC TTGCAACGCC TGGAGCTGAC CTTGCGCCAG
ATCAACAGTC GGACGCTGGA CCTGCATGCG ATAAAACGCG CCACGCCGCT GGCGTTTCCG
CTGCTGGTCG AGCGTTTTCG TGAGAGCCTC AGTTCGGAAA AACTCGCCGA CCGCATCGCG
CGCATGGTCC GCGATCTGGA AAAAGCTGCA GGGCCGGAGC CTGAACGATG A
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| Protein sequence | MSRPTDFARR WFLARGWKPF AFQKEVWAAV KNGESGLLHA STGSGKTYAV WFAALNRFAN
ANANTNTNTL TADDKPRKRK PPAAPLSVLW ITPMRALAAD TARALEAPLA ELDIAWSVGL
RTGDTSGSER ARQSRRLPSA LITTPESLTL LLTRADAQVA LSTLKMVVVD EWHELIGNKR
GVQLQLALAR LRHWNPQLIV WGISATLGNQ EHAQQVLIGD GGVTVQGKIV KQLLVDTLLP
TAIERFPWAG HMGLRMLPQV VAEVHSSASC LVFTNTRAQS EIWYQALLEA RPDWAGLIAL
HHGSLAREVR DWVERALKEG VLKAVVCTSS LDLGVDFLPV ERVLQIGSPK GVARLMQRAG
RSGHAPGRPS RVTLVPTHSL ELVEAAAAHD AVAARMIEPR ESPHQPLDVL VQHLVSMALG
GGFLPDELLV EVRSAWAYRD LSDDQWQWAL AFVRNGGHSL TAYPDYRRAE PDEHGVWRVP
DARLARRHRM SVGTIVSEAT VNLKYWKKGG GGGSLGSVEE GFIARLKPGD GFLFGGRLLE
LVRVENMTAY VKRATGKKAA VPRWNGGRMP LSSELANAVV EQFDAAARGE FNSPEMQAIK
PLLEVQQQWS GLPQRDTLLA ETLKSREGWH LFLYPFAGRH VHLGLGSLLA WRLSRYQPLT
FSIAVNDYGL ELLSASEIDW AQALQGDLFS ETDLLADIIA SLNAGELALR RFREIARISG
LVFSGYPGAA KSNRQLQASS GLFFEVFKQY DAENMLLTQA EQEVLRQELD LQRLELTLRQ
INSRTLDLHA IKRATPLAFP LLVERFRESL SSEKLADRIA RMVRDLEKAA GPEPER
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