Gene PSPTO_4130 details

Gene Information

• Locus tag: PSPTO_4130
• ID: 1185810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4654399
• End bp: 4654893
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637395476
• Product: hypothetical protein
• Protein accession: NP_793891
• Protein GI: 28871272
• COG category: [S] Function unknown
• COG ID: [COG5608] Conserved secreted protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTTC AGGCGCACAT TACAAGAATC ATAAGCCTTG CGTTGGTCAT GTTCGGGCTG 
AGTGGATGCT CGTACCTGAG TTTTGACCGC TTCGAGGATC CAGAAGTGCA GTTGTTGAAA 
GTCCAGGTGG TCAAGGCCAG GCTGACGCAA CAGGATTTCA AGCTGTATTT CGAGGTCGAC 
AATCCTAACG ACTCCAGCCT GTTCGTACGA GGCCTGAACT ACAAGATCAT GCTCAATGAG 
GTGGTGCTCG CCGATGGCAA ATCCAGCGAC TGGTTTTTTG TCGACGGTCA CAGCCAGAAA 
ACCTTTGTGG TGCCCATCCG CACCAACCTC TGGGGGCACG CCAGGTACAT CGCTCAATTG 
CTGAAGAAGC CCGATGAGCT GATCCACTAC AGATTTGAAG GCAAACTCAA GACCGGCATG 
GTCTTCAGGC ACAGCGTGCG GATCGGCAAG TCTGGCGATG TGGCCCCGTA CGAACTTATC 
CAGCACCGCA AATAG 

 

Protein sequence

MFFQAHITRI ISLALVMFGL SGCSYLSFDR FEDPEVQLLK VQVVKARLTQ QDFKLYFEVD 
NPNDSSLFVR GLNYKIMLNE VVLADGKSSD WFFVDGHSQK TFVVPIRTNL WGHARYIAQL 
LKKPDELIHY RFEGKLKTGM VFRHSVRIGK SGDVAPYELI QHRK