Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3859 |
Symbol | |
ID | 1185530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4371357 |
End bp | 4372211 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395210 |
Product | hypothetical protein |
Protein accession | NP_793631 |
Protein GI | 28871012 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAT TTCGTAAAGT GCTGTCCATT CAGGCGGGCC AACCTGCCTC AGACGGTGCA GGGGTGAAAC TGACGCGCGT TTTCGGCGGC CGGGGCATCG AGCTGTTCGA TCCGTTCCTG ATGCTCGACG AGTTCGGATC GGACAAGCCC GGCGACTATA TCGCAGGCTT TCCGCCCCAT CCGCATCGCG GCTTCGAGAC CGTGACCTAC ATGCTTGAAG GGCGTATGCG CCATGAAGAC CACATGGGCA ATGTCGGCCT GCTGCAGGGT GGCGGTGTGC AGTGGATGAC CGCAGCACGC GGAATCATTC ACAGCGAAAT GCCCGAACAG GAAGAAGGCA CCATGCGTGG GTTTCAGCTA TGGCTGAACC TGCCGGGCAA GAATAAGCTG AACGAAGCCA GTTATCAGGA CATCCAGCCG GAAAACGTCC CTCGACTGAC CACCGAAGGC GGTGTGCAGG TGGTAGTGAT CGCCGGGCAT TTCGACGATG GCACGGTTCG ACAGGCCGGG GCTGTGCAGC GCCCGGACAC CGAGCCGCTG TACCTGGACT TCCATATGCC CGCCGGCAGT CGCATCAGCC CGCAGGTGCC CGAAGGACAC CTCGCGTTGC TGTATGTGTA CGAAGGCAGT ATCGAGATCG AGGGCAGCCC GCAAGCCGTG GCTACTCGCC AGATGGCGCG CCTGTCTGGC GAAGGTCAAT TGCAGATCAG CAGCACCCAC GGTGCGCGAG TGCTGTTGAT TGCAGGCAAA CCTCTGCGCG AGCCCATCGT GCAATACGGG CCGTTCGTTA TGAACACCCG TGAAGAGATC GAACAGGCGC TGCGTGACTT CCGGGAAGAT CGTCTGACGG CGTGA
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Protein sequence | MTQFRKVLSI QAGQPASDGA GVKLTRVFGG RGIELFDPFL MLDEFGSDKP GDYIAGFPPH PHRGFETVTY MLEGRMRHED HMGNVGLLQG GGVQWMTAAR GIIHSEMPEQ EEGTMRGFQL WLNLPGKNKL NEASYQDIQP ENVPRLTTEG GVQVVVIAGH FDDGTVRQAG AVQRPDTEPL YLDFHMPAGS RISPQVPEGH LALLYVYEGS IEIEGSPQAV ATRQMARLSG EGQLQISSTH GARVLLIAGK PLREPIVQYG PFVMNTREEI EQALRDFRED RLTA
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