Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3850 |
Symbol | |
ID | 1185521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4359569 |
End bp | 4360420 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637395201 |
Product | hypothetical protein |
Protein accession | NP_793622 |
Protein GI | 28871003 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.288114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCG TTTATCTGTT ACTGGATGCA GCCCTGATCA ACGATCTCGC CCAGCGCCTT CTGCACATGA AAGAGTTCGC CCGGTGCCAA CCGCTCTATG TGAACACCGC CTACGAAACG CTTGCAGACT GCGGCCCCAT GCTGGTTGAG GTCACGTCAA ACATACCGTT GCAGGAAATG TTCAAGCAGC AATGGCGGGA TGATTCGGGC ATCTGGCTGG AATCTGCGGC CAAAGAATCC GAGCTCATCG AGCATTTGCG CAGCCTGGTG CATGTGCAAC TGGACAGTGG TGTGACCGTG CTTTTTCGTT ATTACGATCC GCGCATTACA CGACTGTGGC TGGCAAGTCT GGAAAACCAT GAGCTTGATT CGATGCTGGG CCCCATCGAC TTGATCAGAC TCCCCCTGAG AGATGGTAGT GATCTGTCGA TCTGTCGGCA CGGGCCAGAA CAACGCGCTG CACGCTATTC AGATAAGCCC TGGCTTACCC TTGGCAGCAG ACAGCTCGAC ACCCTGTGCC AGGCTCAGCA AGAGCGGTTC GACCGGCACC TGCTTGATCA CTGCCAACGT TTCTTTCCTG AAACACTTGA GGGGCTTGGC CCCGACGAAA GACATCAATG GGCAAAAGCC TGCCGAAAAA GCGCGGCACG TCATGGCTAC AGCACCGACA GTCAGGTCAC CCGCTGGGTC GCGCTTTTCG CTTGCCTGGG TGCGAACTTT CCTCACGGCG ACACTCATGC GCCTTATCAG GTCATTCTCG AAAAGCGGTT TATGTCGCCC GAAGAGCGCC TGGACGAGCT GCTTGCTGAA CTGCCCCGCC AACTCATCCG CAACATGGAG TCTGCCGTAT GA
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Protein sequence | MSRVYLLLDA ALINDLAQRL LHMKEFARCQ PLYVNTAYET LADCGPMLVE VTSNIPLQEM FKQQWRDDSG IWLESAAKES ELIEHLRSLV HVQLDSGVTV LFRYYDPRIT RLWLASLENH ELDSMLGPID LIRLPLRDGS DLSICRHGPE QRAARYSDKP WLTLGSRQLD TLCQAQQERF DRHLLDHCQR FFPETLEGLG PDERHQWAKA CRKSAARHGY STDSQVTRWV ALFACLGANF PHGDTHAPYQ VILEKRFMSP EERLDELLAE LPRQLIRNME SAV
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