Gene PSPTO_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3640 
Symbol 
ID1185305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4099238 
End bp4100374 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content63% 
IMG OID637394989 
Producthypothetical protein 
Protein accessionNP_793416 
Protein GI28870797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTT TTCTGCCCTC TCTCGATACG CCTGTTGCAC TGCTGGACAT GCCGCGCATG 
CAGCGCAACA TTCAGCGCAT GCAGCAACGC ATGAATGAAC TGGGCGTGCG CTTGCGCCCG
CACGTCAAGA CCAGCAAGTC GCTGCCGGTC ATTCAGGCGC AGATGGCTGC GGGTGCCCGT
GGTGTGACGG TCTCGACCCT GAAAGAGGCC GAGCACTGTT TTGCCGAGGG CATCAGCGAC
GTGTTTTACG CCGTTGCCAT TGCACCCGGC AAACTGGATC AGGCACTCAA GCTGCGGCGC
ATTGGCTGCC GCCTGAGCAT CCTGACCGAC AGCGTGGTCG CAGCACAGGC CATTGTTGCC
TTTGGCCAGC AGCACGATGA GCAATTCCAG GTATGGATCG AGATCGATTG CGATGGCCAT
CGCTCGGGGC TGACGGTCGA AGACAACGCG TTGATCGAGG TGGCGAGAAC ACTGGTCGAA
GGCGGCATGC AACTGCGCGG GGTCATGACC CACGCAGGCT CCAGCTACGA CCTCGACACG
CCTGAAGCAC TGCAAGCCCT GGCCGAACAG GAACGCCTGC TCTGCGTCAG CGCCGCCGAA
CGCATTCGCC AAGCCGGGCT GCCCTGCCCG GAAGTCAGCA TCGGCTCGAC ACCCACCGCA
TTGTCTGCGC AAGGTCTTGC AGGCGTGACC GAGGTGCGCG CGGGCGTGTA TGTGTTCTTC
GATCTGGTGA TGCACAACAT CGGCGTGTGC GGTGCAGACG AGCTGGCCTT GAGCGTGCTG
ACCACCGTTA TCGGCCATCA GCAGGACAAG GGCTGGGTTA TCGTCGACGC AGGCTGGATG
GCCATGAGCC GGGATCGCGG CACCCAGCGC CAGCGTCAGG ATTTCGGTTA CGGCCAGGTC
TGCACTGAAA CCGGCGAGTG GATCGATGGC GCGCGAGTGA CCGGGGCCAA TCAGGAGCAC
GGCATTATCA CCCTCGCCAC AGGCGACAGC ACAGACATCA CCGGCCGCTT CCCGATTGGC
AGCCGGCTGC GCATTCTGCC CAATCACGCG TGCGCGACCG GCGCGCAATT CCCGGACTAT
CACGCCTGCG ACGCCGAAGG CGCAGTGCAC ATCTGGAGTC GTCTGCATGG CTGGTGA
 
Protein sequence
MSAFLPSLDT PVALLDMPRM QRNIQRMQQR MNELGVRLRP HVKTSKSLPV IQAQMAAGAR 
GVTVSTLKEA EHCFAEGISD VFYAVAIAPG KLDQALKLRR IGCRLSILTD SVVAAQAIVA
FGQQHDEQFQ VWIEIDCDGH RSGLTVEDNA LIEVARTLVE GGMQLRGVMT HAGSSYDLDT
PEALQALAEQ ERLLCVSAAE RIRQAGLPCP EVSIGSTPTA LSAQGLAGVT EVRAGVYVFF
DLVMHNIGVC GADELALSVL TTVIGHQQDK GWVIVDAGWM AMSRDRGTQR QRQDFGYGQV
CTETGEWIDG ARVTGANQEH GIITLATGDS TDITGRFPIG SRLRILPNHA CATGAQFPDY
HACDAEGAVH IWSRLHGW