Gene PSPTO_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3576 
SymboltvrR 
ID1185241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4033365 
End bp4033988 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID637394928 
ProductTetR-like virulence regulator 
Protein accessionNP_793355 
Protein GI28870736 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCC GTACTGAAGC TCGTCGCGAA GCCATCATTG ATGCGGCAGC GAGCGTTTTC 
CTCGAAATGG GCTACGAACG CGCGTCCATG AACGAAGTCA CCAAACGGAT GGGTGGCTCC 
AAGGCAACGA TCTACAGCTA TTTCCCCTCC AAGGAAGAGC TGTTCATCGC CGTGGTCAAC 
AGGCTCGCAA CGGCCCATCT GGCCGACGCG GTTTCGGAGC TGACGACCTA CAACGGCGCG 
GATACAAACG CAGAGTTGAG AACGCTGTTC ACTCGTTTCG GCGAGCGAAT GCTGATGGTG 
CTCATCAATG ATGACAATGC GCTGGCCGTC TACCGCATGG TGGTCGCTGA ATCCGGGCAC 
TCCGCCATCG GCATGATGTT CTATGATTCC GGCCCTCGGG AATGCCTGCA GACGGTGACC 
GCATTGATGA CGGCAGCCAT GCAGCGCGGC CAGTTGCGCG AGACCGACCC ACATATAGCC 
GCGCTGCAAC TTACCTCGTT GCTGACTGCA GAAACCGACA TTCGTCTTTA CCAGCAGACA 
CCCGCACGAC TGAGTGTCGA GCAGATCAGC GCCATGGTCG AAAGAGCCGT CGATACGTTC 
ATGCTGGGGA TGGAAAAACG CTGA
 
Protein sequence
MKVRTEARRE AIIDAAASVF LEMGYERASM NEVTKRMGGS KATIYSYFPS KEELFIAVVN 
RLATAHLADA VSELTTYNGA DTNAELRTLF TRFGERMLMV LINDDNALAV YRMVVAESGH 
SAIGMMFYDS GPRECLQTVT ALMTAAMQRG QLRETDPHIA ALQLTSLLTA ETDIRLYQQT 
PARLSVEQIS AMVERAVDTF MLGMEKR