Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3575 |
Symbol | |
ID | 1185240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4032615 |
End bp | 4033136 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637394927 |
Product | hypothetical protein |
Protein accession | NP_793354 |
Protein GI | 28870735 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCA TTGATTTCAA TAAGCCCGTC AAACGCTCTT TTCGCGGAAA TACGGCACCG GCACCTCCGC TCGAGAAAGT GCTGACCGTC ATTCTGAAAA CCGATGTGCC TGTCCTCATG GGCATATGCA GCGACGGGCT GCGCAGTAAC AGCGCTATTC TGGGCGGTGA ATTCCAGGCG GAGTATTTCA GCGGTTCGGT GCTTTCCGGT GGTGGCAATG TGCTTGTCGA GTTGTCGTCA GAGCTTGCCT TTCTGGAAAC CCGCTTCACC CTGATCACTC AACTGGGTGA ACTGATCAAC GTCGAATGTA AAGGCGTTCT GCTCATGGAT GAAGAGGGTC AGCAGGAACT GCAGAGCGGC GTGTGGCCCA TCAGCGAAGG CCACTACCAG TGTACGTGCA CGCCACGTTT CCAGGTTTCG CTTGGCCCTA ACGACTGGCT GGAGAAAAGC GCCTTCATTG GCAAGATCGA CTACATTCAG CGCAACGAAA CGTTGATCAG TTTTTACCGG ATGAAGCTCT GA
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Protein sequence | MNIIDFNKPV KRSFRGNTAP APPLEKVLTV ILKTDVPVLM GICSDGLRSN SAILGGEFQA EYFSGSVLSG GGNVLVELSS ELAFLETRFT LITQLGELIN VECKGVLLMD EEGQQELQSG VWPISEGHYQ CTCTPRFQVS LGPNDWLEKS AFIGKIDYIQ RNETLISFYR MKL
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