Gene PSPTO_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3575 
Symbol 
ID1185240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4032615 
End bp4033136 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content53% 
IMG OID637394927 
Producthypothetical protein 
Protein accessionNP_793354 
Protein GI28870735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA TTGATTTCAA TAAGCCCGTC AAACGCTCTT TTCGCGGAAA TACGGCACCG 
GCACCTCCGC TCGAGAAAGT GCTGACCGTC ATTCTGAAAA CCGATGTGCC TGTCCTCATG
GGCATATGCA GCGACGGGCT GCGCAGTAAC AGCGCTATTC TGGGCGGTGA ATTCCAGGCG
GAGTATTTCA GCGGTTCGGT GCTTTCCGGT GGTGGCAATG TGCTTGTCGA GTTGTCGTCA
GAGCTTGCCT TTCTGGAAAC CCGCTTCACC CTGATCACTC AACTGGGTGA ACTGATCAAC
GTCGAATGTA AAGGCGTTCT GCTCATGGAT GAAGAGGGTC AGCAGGAACT GCAGAGCGGC
GTGTGGCCCA TCAGCGAAGG CCACTACCAG TGTACGTGCA CGCCACGTTT CCAGGTTTCG
CTTGGCCCTA ACGACTGGCT GGAGAAAAGC GCCTTCATTG GCAAGATCGA CTACATTCAG
CGCAACGAAA CGTTGATCAG TTTTTACCGG ATGAAGCTCT GA
 
Protein sequence
MNIIDFNKPV KRSFRGNTAP APPLEKVLTV ILKTDVPVLM GICSDGLRSN SAILGGEFQA 
EYFSGSVLSG GGNVLVELSS ELAFLETRFT LITQLGELIN VECKGVLLMD EEGQQELQSG
VWPISEGHYQ CTCTPRFQVS LGPNDWLEKS AFIGKIDYIQ RNETLISFYR MKL