| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3563 |
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| Symbol | gntR |
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| ID | 1185228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4021034 |
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| End bp | 4022050 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394915 |
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| Product | gluconate utilization system GNT-I transcriptional repressor |
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| Protein accession | NP_793342 |
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| Protein GI | 28870723 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.059587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCA TTGGTTCCCG CTCTACAGGT CGGCCCACCT TGAACGAGGT GGCGCGGCTG
GCGGCCGTTT CGCCGATTAC CGCTTCCCGT GCATTGCGCG GTGTTGCCAC TGTTGCCCCG
GAGCTGGTCG AGAAAGTCCG TGCCGCTGCG CAAAGCCTGG GCTATGTCGC CAACCCGGCG
GCCAGAGCGT TGGCCTCTTC CTGCAGCCAG ACAGTGGTCG TGCTGGTGCC ATCGCTGTCC
AACCAGTTGT TCATCGAAAC CCTTGAAGCC ATTCAGGACG TTCTGCGCCT GCGGGGGCTG
GATGTGGTGA TCGGCAACTA TCACTACTCG CCGGAAGAAG AAGAGAAGCT GCTGCGCAAC
CATCTGGTCA ATCGTCCGCG CGGCGTTCTG CTGACCGGCT TTGACCACAC CGCTGCATCG
CGCCAGATGC TCGAGACCAG CGGCGTGCCG TGCGTGCACA TGATGGAACT CGATACCCGT
CTCGGTGCTT ACTGTGTCGG TTTCTCCCAG CAACAGGCCG GGGCCGAAGC CGCCCGCCAT
TTGCTGGGCC GTGGGCGAAA GCGCCTGGCC TATATGGCGG CGCAGCTCGA CCCTCGCGTA
TTGCAGCGCG GGGCGGGGTT TCGTCAGGTG CTGGAAGAGG CCGGAGTGTT CGATCCCGCG
CTGCAAGTCT CGACCCGTCA GTCATCCTCG ATTGGCCTGG GCGGTGAGTT GTTCGCCCGC
CTGCTCGACG AGCACCCGGA CGTGGACGGA GTTTTCTTCT GCAACGACGA CCTGGCTCAG
GGTGCAGCGC TGGAAGCTTT GCGCCTGGGT GTGGCGATCC CCGAGCGGGT GTCGCTGGTG
GGCTTCAACG ATTTGCCTGG CTCGGCGCAC ATGGTTCCGC GCCTGACCTC GATTCGCACA
CCTCGCCAGG AAGTCGGCCA GCGCGCTGCG CAGCTGTTGC TGGGGCTGCT CGACGGGATC
ACCCAGCATC CGCAAGTAGA CCTGGGCTTC GAGCTGGTAG TGCGGGAAAG CTCCTGA
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| Protein sequence | MTRIGSRSTG RPTLNEVARL AAVSPITASR ALRGVATVAP ELVEKVRAAA QSLGYVANPA
ARALASSCSQ TVVVLVPSLS NQLFIETLEA IQDVLRLRGL DVVIGNYHYS PEEEEKLLRN
HLVNRPRGVL LTGFDHTAAS RQMLETSGVP CVHMMELDTR LGAYCVGFSQ QQAGAEAARH
LLGRGRKRLA YMAAQLDPRV LQRGAGFRQV LEEAGVFDPA LQVSTRQSSS IGLGGELFAR
LLDEHPDVDG VFFCNDDLAQ GAALEALRLG VAIPERVSLV GFNDLPGSAH MVPRLTSIRT
PRQEVGQRAA QLLLGLLDGI TQHPQVDLGF ELVVRESS
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