| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3409 |
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| Symbol | clpP-1 |
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| ID | 1185069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3847007 |
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| End bp | 3848152 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394760 |
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| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
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| Protein accession | NP_793192 |
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| Protein GI | 28870573 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.702089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCGC TGTTACCGTT TCGCATTTTC AACAAGGCCC CAGTTGCCTT GGCGGTCGAG
GACCAGAACT GGTACCGCAT CAAGGCTGAA ACCCAGGCCG AGCAGACCAC CATCGAGATC
TACATCTACG GTGAGATCGG CGGCTGGGGC ATTACGGCCA ATCAGTTCAT TCAGGACCTG
AAAGCCATTG ATGACGGCGT GTCGCCCATC GTGGCTGCGT TCAACACCAT CGGTGGCGAC
CTGTTCGACG GGCTGGCAAT TCACAATGCG CTGAACCGGC TGGGTGAGCG CTGCACGGCG
CGGATTGACG CGCTGGCGGC CAGTGCCGGG AGTGTTGCCG CGTGTGGCGC ACACCGCATG
GTCATGGCGT CCAACGCCAT GTTGATGATC CACAACCCGT GGACCTACAC AGCCGGTGAT
GCCGAGGACC TGCGCAAGGT CGCCGATGTG CTGGACCAGA CGCTGGAAGC CATCATTGCG
GCGTACAAGG CCAAGTCGCC GGACATCGAC GAGGTCGAGC TGCGGCGCAT GGTCAACGCT
GAAACCTGGC TCACCGCGCC GGAAGCACTG GCGCTTGGCC TGGCCGACGA GATCGGGGCG
GGAGTAGAGG TCAAAGCCTG CCTGGGGCAG GGGGCTGCCA TACAGCGGTT CCGCCAGACG
CCAAAGGCCT TGCTGGATCA GCTCAACGCC GTTGAGCCTG AGCCAGAGAA AACTGATCCA
CCAACTGATC CTGAACCGGC TGATGCATCC GCCTTGGCGC TGATGATTAC GAAAGCTTGC
GGCGCGGCGG GCATCAACAA CCTGATCGAG CCTTTGATTG CGTCCACCAA GCTTGCCGAT
CAAGCAACGG TGCAGGCGGC TATCACCCAG GCCAAGGGCG TGCGCGACCT TTGTGTGGCG
GCTCGCTTGC CGGAGCTGAC CGCCGAATTC GTCAGCGCAG GTCTGGACAA GCAGGCCGTT
CAGGCGCGTC TGTTTGAGAC GCTGGTCAGC AGCGGCAAGG GCTTTGAAAT CGATAACAGC
CTGCCGCTGC AGGACGATCC ACCGGCCAAG GTTCAGGCCA GACAACCCGA TCACCACGAC
ATCTACGCGG CCCGCAGGGC GGCGCAGGGT GGCAAGAAAC CGACCTCTAC AGGAGCACGT
CCATGA
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| Protein sequence | MKPLLPFRIF NKAPVALAVE DQNWYRIKAE TQAEQTTIEI YIYGEIGGWG ITANQFIQDL
KAIDDGVSPI VAAFNTIGGD LFDGLAIHNA LNRLGERCTA RIDALAASAG SVAACGAHRM
VMASNAMLMI HNPWTYTAGD AEDLRKVADV LDQTLEAIIA AYKAKSPDID EVELRRMVNA
ETWLTAPEAL ALGLADEIGA GVEVKACLGQ GAAIQRFRQT PKALLDQLNA VEPEPEKTDP
PTDPEPADAS ALALMITKAC GAAGINNLIE PLIASTKLAD QATVQAAITQ AKGVRDLCVA
ARLPELTAEF VSAGLDKQAV QARLFETLVS SGKGFEIDNS LPLQDDPPAK VQARQPDHHD
IYAARRAAQG GKKPTSTGAR P
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