| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3248 |
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| Symbol | |
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| ID | 1184906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3671845 |
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| End bp | 3673467 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394599 |
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| Product | dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative |
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| Protein accession | NP_793032 |
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| Protein GI | 28870413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.49035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCT GGCCCCAGCG CCTGCCCTGG CTGCTATGCC TCGCCATGAC GGCGACATTC
ATGCACACCC CGCCCGCCCT GGCGCGTGGC GAAACACCGG TCGATCAACT GGTCATCGGC
ATGAGCATGA TCAACCTGTT GTCGCTGGAC CCGGCAGGTG CCACCGGCCT CGAGGTGTCC
GAGGTCAACG CCAATGTCTA CGACATGCTG CTGGAGCAGG ATGCCGCGCG CCCCGATCAG
TTGATTGCGG CGCTGGCCGA GCGCTGGGAA ATCAGCCCTG ACCGCATGCG CCTGACCTTC
CACTTGCGTG CGGGTGTGAC GTTTCACTCC GGCAACCCGC TTACGGCTCA GGACGTTGCC
TGGTCGCTGC AACGCGTGGT CACACTCAAC AAGGCCTTGG CCTCGACCTG GAAAGCCTAC
GGTTACACCG CGAAAAACGT CAGCGAATTG ATGCGCGCCG AAGGGCCTTC GACCTTTGTG
CTCGACCTGC CCAAAGCCAC CGACCCGATG CTGGTGCTCA ACACCCTGGC GACCTCGCCC
AGCGCATTCG TCATCGACCG CCTGACCGCG CTGCAACACG CCAGGGGCGA TGATCTGGGC
GCCGGCTGGC TGACCACCAA CACGGCGGGC TCCGGGGCGT TCAAGCTGGA CATCTGGCGC
GCCAACGACG TGATCCTGAT GAGCCGCTTC GACTCGTACT GGCGCGGACC GGCGAAAATG
CGCCGGGTGA TCATGCGCAA CATGACTGAG TCCCAGGCGC TGCGCCTGAT GGTCGAGCGC
GGCGATCTGG ACGTGGCGCG CGGCATGGCA GCCAGCGACA TCAAGGCCCT GACCCGCTCG
CAAGACGTCA GCGTGCAGGC CATACCGCGC GGCACGCTGT ACTACGTCGC GCTGAGCATG
GAGCAACCCC TGTTTCAGGA CATCCGGGTG CGTCAGGCGA TCCGTGCACT GATCGACTAT
CAGGGCATCA ACAACGTAGT GATGCCGCAT TACGGCGTGA TCAATCAGCG CCCGTTGCAA
CTGGGGCTGG CGGCCAGGCT TGATGATCCG GGCTACGCGC TGAATGTCGC CGAGGCCAGT
CGCCTGCTGG CCGAAGCCGG GCACCCGAAC GGTTTCAAGA TCACCATTCG TTCGCTGACC
GATTCACCGT TCATCAACAT CGCCACCAGC CTGCAATCGA CCCTGGCCCA GGCCGGCATT
CAGGCGACGA TCATCACCGG CACCGGCAAC CAGATCTATG GCGCAATGCG CGACCGGCGT
TTCGACATTC TGGTCGGGCG TGGTGGTGGC GGCGCCGAGC GCCATCCGCA CTCCAGCCTG
CGCGCCCTGA TCTACAACCC GGACAACCGC GAAGAGGCCA GGCTGAGCAA CTTTCAGGGC
TGGCGCACCT CGTTCTACAA CGCCGAAATC AACCAACTGA TCGAGCAGGC CGAACGTGAG
CGCGATGCCG GGCAACAATT GGCCGACTAT CAGCGCATTC AGACGCTCTA CGACCAGAAA
GCCGGGCCGA TCATGCCGCT TTCACAGATG ACCGACGAAG TGGTGATCCA CGCCGATGTC
CAGAATTACC TAGGGCACAG CGCCGCCACC ACCCGACTGC GTGACGTCTA CAAGCAACGC
TGA
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| Protein sequence | MKFWPQRLPW LLCLAMTATF MHTPPALARG ETPVDQLVIG MSMINLLSLD PAGATGLEVS
EVNANVYDML LEQDAARPDQ LIAALAERWE ISPDRMRLTF HLRAGVTFHS GNPLTAQDVA
WSLQRVVTLN KALASTWKAY GYTAKNVSEL MRAEGPSTFV LDLPKATDPM LVLNTLATSP
SAFVIDRLTA LQHARGDDLG AGWLTTNTAG SGAFKLDIWR ANDVILMSRF DSYWRGPAKM
RRVIMRNMTE SQALRLMVER GDLDVARGMA ASDIKALTRS QDVSVQAIPR GTLYYVALSM
EQPLFQDIRV RQAIRALIDY QGINNVVMPH YGVINQRPLQ LGLAARLDDP GYALNVAEAS
RLLAEAGHPN GFKITIRSLT DSPFINIATS LQSTLAQAGI QATIITGTGN QIYGAMRDRR
FDILVGRGGG GAERHPHSSL RALIYNPDNR EEARLSNFQG WRTSFYNAEI NQLIEQAERE
RDAGQQLADY QRIQTLYDQK AGPIMPLSQM TDEVVIHADV QNYLGHSAAT TRLRDVYKQR
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