Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3205 |
Symbol | |
ID | 1184862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3598222 |
End bp | 3599412 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394559 |
Product | dehydrogenase, isocitrate/isopropylmalate family |
Protein accession | NP_792993 |
Protein GI | 28870374 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0643665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCGC AAGTACTTCG CAAACGCATT TGCGTGCTGC CCGGCGACGG TATTGGTGTT GAAGTCATGG AGGCTGCCTT GCCGGTGATC GCTGCGCTGG GCCTGCCTTT TGACCTGCTG CACGCCGACA TCGGCTGGGA ATGCTGGAGG CGCGAAGGCG AAACCGTTCC GGACGACACC TGGAAGGTTA TGGCCAGCTG TGATGCGACG CTGCTGGGCG CGATCACCAG CAAGCCTCTG GCGGAAGCCG AGGCCGAACT GCCGCTGCCA CTTCAGGGCC ACAGCCGCCG GTATGTCAGC CCGGTCATTC AGCTCAGGCA GAATCTTGAC CTGTACGCCA ATGTTCGCCC GGTGACCGAC ATGACCGGCG AAAACAGATT TCGCTTTGTG GTGATCAGAG AAAACACCGA AGGCCTTTAT GCTGGGCTGG ACTTTGGGCG TATTCCGGAC GCGCTCGTGC CCTTGCTTGA AGCGCGCGAA GCACTGGGCG CTGCCTGGCA AAGAGCCGGG CAGGAGGATG CGACCGTTAC CCTGCGCTTG CAGACGCGCA GCGGCTTGAC GCGTATTTTC GAATACGCTT TTGACTATGC ACGGAATAAC AATTTCTCTC GCGTAACGTT TGTCGACAAG CCGATGGTGC TTCGCCACAG CAGCGCTTTT GCCCGGGTGA TTTTCGAAGA AACAGCGCAG CGCTACCCGG ATATAACCGG CGCTATCGAG AATGTCGATG CCGTTGCCCT GTGGATGGTT CAACGACCCG AGCGCTTTGG CGTGATTGTT GCCGAGAACA TGTTCGGTGA CATCCTCTCG GATCTGGGGG CCGGTGTGAT GGGAGGGCTC GGGTTTGCGC CCAGCGGCAA CTTTGGCAAC TCCGGTGCTT ACTTCGAGCC GGTACATGGC AGCGCACCCG CCCATGCGGG GCTGACTAAA GCCAACCCGA GCGCGATGTT TCTGGCCATT GCCATGATGC TGGAACACTT GGGTTATCCG GCCCAATCGG ATTGCATTAC CCGTGCGGTC AGTCTGGTCG CTCGCTCGGC GGTGCGCACT TATGACCTGG GCGGTTCTCA TACCACTTGC CAGGTGGGCG AGGCCATTGT TCAACAGTGT GTGGAGTTGC AGGGGCTGTT GGTTGACCGC CGTGAGCGTT CCCGGTCTGC TCAAGGAGAA CGCCATGTCA GTGCCCTTTG A
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Protein sequence | MSAQVLRKRI CVLPGDGIGV EVMEAALPVI AALGLPFDLL HADIGWECWR REGETVPDDT WKVMASCDAT LLGAITSKPL AEAEAELPLP LQGHSRRYVS PVIQLRQNLD LYANVRPVTD MTGENRFRFV VIRENTEGLY AGLDFGRIPD ALVPLLEARE ALGAAWQRAG QEDATVTLRL QTRSGLTRIF EYAFDYARNN NFSRVTFVDK PMVLRHSSAF ARVIFEETAQ RYPDITGAIE NVDAVALWMV QRPERFGVIV AENMFGDILS DLGAGVMGGL GFAPSGNFGN SGAYFEPVHG SAPAHAGLTK ANPSAMFLAI AMMLEHLGYP AQSDCITRAV SLVARSAVRT YDLGGSHTTC QVGEAIVQQC VELQGLLVDR RERSRSAQGE RHVSAL
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