Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3204 |
Symbol | |
ID | 1184861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3597525 |
End bp | 3598238 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394558 |
Product | hypothetical protein |
Protein accession | NP_792992 |
Protein GI | 28870373 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0684] Demethylmenaquinone methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.295684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTGC CCTTTGAATA CACGCCTATC GCGCAGAGCG TGCTCGATGA ATGCGAGCAT CTGGACACGG CATCGTTGTC TGACGCACTG GACAGCCTTG GCATCGACGG CGGACTGCCG GGCATTGCTT CGCAAGTACC GGGCACACGC TGCGTCGGTA TCGCCTTCAC GGTGCAGTAC CAACCGGTTG ATGCGTCAGA AGGGTTCAGA GGGGCTGCCA ATTATATTGA TCAAGTGCCG AGCGGTTCTG TGATTGTCTC TTCGAATTCG GGACGTCATG ACTGCACGGT GTGGGGTGAC ATCATGACCC ACTTTGCCTT GGCCAACGGC ATCAAAGGCA CGGTTATAGA TGGCGTTGCA CGTGATATCG ATACCGTTAT CAACTGCAAC TACCCGTTGT TCAGTCGCGG ACGTTTCATG CAGTCGGCGA AGAACCGTAC ACAACTCAAG GCCGTCCAGG TGCCGCTCGT TATAGATGGC ATCACCATTC AGCCGGGAGA CCTGATGGTG TGTGACGGCA GCGGCTGTGT TGTGGTCCCG CAGCAACTGG CGGCCGAAGT GGTGCTGCGT GCCAGGGCCG TAGAGCAGAC CGAGCGCCGT ATCATCGAAG CCATATCCTC CGGTTCGACA CTTGAGCAGG CGCGAATGAC ATACCGCTAC GACCAGCCCT GGTTGAGCGA GGCTGAACAC GGTGGTACGC AAGTGCCGTC GTAG
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Protein sequence | MSVPFEYTPI AQSVLDECEH LDTASLSDAL DSLGIDGGLP GIASQVPGTR CVGIAFTVQY QPVDASEGFR GAANYIDQVP SGSVIVSSNS GRHDCTVWGD IMTHFALANG IKGTVIDGVA RDIDTVINCN YPLFSRGRFM QSAKNRTQLK AVQVPLVIDG ITIQPGDLMV CDGSGCVVVP QQLAAEVVLR ARAVEQTERR IIEAISSGST LEQARMTYRY DQPWLSEAEH GGTQVPS
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