Gene PSPTO_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3166 
Symbol 
ID1184823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3558705 
End bp3559667 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content58% 
IMG OID637394522 
Producthypothetical protein 
Protein accessionNP_792956 
Protein GI28870337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.252461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCTG CTTGGTTCCG GCAACCTGTG TTTTCGCCCC TCATGCTCAA GGAAGACCTG 
CCAATGATGC TGTGCAAGCT GTCAGCAAAT CGCCGCGCCC TGCCTCTTTC CCCTCTCCTG
TCTCTCATAA CGCTGCTCGC GCTGCTGCTT AGCGTGGCGA TTTCACCCGC ATGGGGCGCC
GATAAAAGCG CCAAGCGCGG CATCGCTTAT GACATCGCCC AGCCTGCCGA CTTGAGCGCG
TTATCGGCAG GTGTGAGCTG GTGGTACAAC TGGAGCCCGA AACCGCATGA CCGCCTGGCG
TCCTACGATT ACGCCTCGAT GTATGGCGTG GACTTCATTC CGATGATCTG GAACGACAAC
GTCGATGACG GCCAGTTGAA ACTCTATCTG CAGGCACACC CAGCCATTCG CTACCTGCTG
GTCATCAACG AACCCAACCT GCTGGACCAG GCCAACATGA CGCCCGAGGC CGCTGCGCGC
TTCTGGCCAA GGCTGGAACA GATCGCGGCG CAGACCGGGG TGAAGCTGGT AGGCCCGGCC
ATGAACTGGG GAACCATGTC GGGTTACGGC GACCCGGTGG TGTGGCTTGA CGCCTTTTAT
GCCGCGTATC GATCGATGAA TCAGAATCGC GACCCGCGCA TCGACTACCT GGCTTTTCAT
TGGTACGACT ATGGTCTGGC GGGGATGCTC GACAGGCTGT CACGCTACGG AAAACCCGTT
TGGGTCACAG AATTCGCCAA TTGGCATGGC CTGGACGACG GCATGCAGAT TGATTCGGTA
GAAAAGCAAA AGCAGCAAAT GGCCAATATG GTTGCCACAC TCGAAGGGCG CGCGGACGTG
TTCAGGTATG CCTGGTTCAC CGGGCGCATG ACTCAGGACC CTCATTTCTC CAGCCTGTTG
AGCAACGAGG GCACACTCAC CGAGCTGGGT CAGTACTACC TTTCGTTGCC GTACAGCCAG
TGA
 
Protein sequence
MLAAWFRQPV FSPLMLKEDL PMMLCKLSAN RRALPLSPLL SLITLLALLL SVAISPAWGA 
DKSAKRGIAY DIAQPADLSA LSAGVSWWYN WSPKPHDRLA SYDYASMYGV DFIPMIWNDN
VDDGQLKLYL QAHPAIRYLL VINEPNLLDQ ANMTPEAAAR FWPRLEQIAA QTGVKLVGPA
MNWGTMSGYG DPVVWLDAFY AAYRSMNQNR DPRIDYLAFH WYDYGLAGML DRLSRYGKPV
WVTEFANWHG LDDGMQIDSV EKQKQQMANM VATLEGRADV FRYAWFTGRM TQDPHFSSLL
SNEGTLTELG QYYLSLPYSQ