Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3166 |
Symbol | |
ID | 1184823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3558705 |
End bp | 3559667 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394522 |
Product | hypothetical protein |
Protein accession | NP_792956 |
Protein GI | 28870337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.252461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCTG CTTGGTTCCG GCAACCTGTG TTTTCGCCCC TCATGCTCAA GGAAGACCTG CCAATGATGC TGTGCAAGCT GTCAGCAAAT CGCCGCGCCC TGCCTCTTTC CCCTCTCCTG TCTCTCATAA CGCTGCTCGC GCTGCTGCTT AGCGTGGCGA TTTCACCCGC ATGGGGCGCC GATAAAAGCG CCAAGCGCGG CATCGCTTAT GACATCGCCC AGCCTGCCGA CTTGAGCGCG TTATCGGCAG GTGTGAGCTG GTGGTACAAC TGGAGCCCGA AACCGCATGA CCGCCTGGCG TCCTACGATT ACGCCTCGAT GTATGGCGTG GACTTCATTC CGATGATCTG GAACGACAAC GTCGATGACG GCCAGTTGAA ACTCTATCTG CAGGCACACC CAGCCATTCG CTACCTGCTG GTCATCAACG AACCCAACCT GCTGGACCAG GCCAACATGA CGCCCGAGGC CGCTGCGCGC TTCTGGCCAA GGCTGGAACA GATCGCGGCG CAGACCGGGG TGAAGCTGGT AGGCCCGGCC ATGAACTGGG GAACCATGTC GGGTTACGGC GACCCGGTGG TGTGGCTTGA CGCCTTTTAT GCCGCGTATC GATCGATGAA TCAGAATCGC GACCCGCGCA TCGACTACCT GGCTTTTCAT TGGTACGACT ATGGTCTGGC GGGGATGCTC GACAGGCTGT CACGCTACGG AAAACCCGTT TGGGTCACAG AATTCGCCAA TTGGCATGGC CTGGACGACG GCATGCAGAT TGATTCGGTA GAAAAGCAAA AGCAGCAAAT GGCCAATATG GTTGCCACAC TCGAAGGGCG CGCGGACGTG TTCAGGTATG CCTGGTTCAC CGGGCGCATG ACTCAGGACC CTCATTTCTC CAGCCTGTTG AGCAACGAGG GCACACTCAC CGAGCTGGGT CAGTACTACC TTTCGTTGCC GTACAGCCAG TGA
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Protein sequence | MLAAWFRQPV FSPLMLKEDL PMMLCKLSAN RRALPLSPLL SLITLLALLL SVAISPAWGA DKSAKRGIAY DIAQPADLSA LSAGVSWWYN WSPKPHDRLA SYDYASMYGV DFIPMIWNDN VDDGQLKLYL QAHPAIRYLL VINEPNLLDQ ANMTPEAAAR FWPRLEQIAA QTGVKLVGPA MNWGTMSGYG DPVVWLDAFY AAYRSMNQNR DPRIDYLAFH WYDYGLAGML DRLSRYGKPV WVTEFANWHG LDDGMQIDSV EKQKQQMANM VATLEGRADV FRYAWFTGRM TQDPHFSSLL SNEGTLTELG QYYLSLPYSQ
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