Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3139 |
Symbol | |
ID | 1184796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3528610 |
End bp | 3528954 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394497 |
Product | hypothetical protein |
Protein accession | NP_792931 |
Protein GI | 28870312 |
COG category | [S] Function unknown |
COG ID | [COG2315] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.010598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAG AAGACATCGC CAGATTCTGC CTGAGCCTGC CCGGCGCGCG CGAGGACTAC AAGTGGGGCG GCGTGCGGGT GTTTTCCATC GTCGAAAAGA AGATGTTCGC GCTCATGGAC CTGACCGGTC AGGACCTCTC ATTCAAGGTC CACCCGGAAT TGTTTCTGGG CTATGTCGAT CGGCCCGGCA TACGTCCTGC GCCGTATCTG GCGCGGGCAC ACTGGGTCAG CGTGGCAGAC CTGCATACGC TGAGTGACGA AGAAGTCCGC GACCTGCTGA CCCGCTCGCA CCAACTGGTG GTGGGCAAAC TGTCGAAAGT GAAGCAGATC GGCCTGAAGT TATAG
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Protein sequence | MYKEDIARFC LSLPGAREDY KWGGVRVFSI VEKKMFALMD LTGQDLSFKV HPELFLGYVD RPGIRPAPYL ARAHWVSVAD LHTLSDEEVR DLLTRSHQLV VGKLSKVKQI GLKL
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