Gene PSPTO_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3139 
Symbol 
ID1184796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3528610 
End bp3528954 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content59% 
IMG OID637394497 
Producthypothetical protein 
Protein accessionNP_792931 
Protein GI28870312 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.010598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAG AAGACATCGC CAGATTCTGC CTGAGCCTGC CCGGCGCGCG CGAGGACTAC 
AAGTGGGGCG GCGTGCGGGT GTTTTCCATC GTCGAAAAGA AGATGTTCGC GCTCATGGAC
CTGACCGGTC AGGACCTCTC ATTCAAGGTC CACCCGGAAT TGTTTCTGGG CTATGTCGAT
CGGCCCGGCA TACGTCCTGC GCCGTATCTG GCGCGGGCAC ACTGGGTCAG CGTGGCAGAC
CTGCATACGC TGAGTGACGA AGAAGTCCGC GACCTGCTGA CCCGCTCGCA CCAACTGGTG
GTGGGCAAAC TGTCGAAAGT GAAGCAGATC GGCCTGAAGT TATAG
 
Protein sequence
MYKEDIARFC LSLPGAREDY KWGGVRVFSI VEKKMFALMD LTGQDLSFKV HPELFLGYVD 
RPGIRPAPYL ARAHWVSVAD LHTLSDEEVR DLLTRSHQLV VGKLSKVKQI GLKL