Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3109 |
Symbol | |
ID | 1184766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3495236 |
End bp | 3496195 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394467 |
Product | cointegrate resolution protein S |
Protein accession | NP_792901 |
Protein GI | 28870282 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00637573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACG TTGATCGCTA CATAGATGCC GCGACCCGTG ACAACACGCG CCGGAGCTAC CGGGCGGCCA TCGAACATTT CGAGGTGACA TGGGGCGGGT TTCTGCCGGC AACCAGCGAA AGCGTCGCGC GCTACCTGGC CTGCCATGCC GGAACATTGT CGGTCAATAC CTTGAAGCTG CGTCTGTCGG CGCTGGCCCA GTGGCATATC AGCCAGGGTT TTGTCGACCC CACCAAGGCA CCGATGGTGC GCAAGGTCAT AAAGGGCATT CGTGCGCTGC ACCCGGCACA GGAAAAACAG GCCGAGCCTC TGCAGTTGCA GGACCTTGAA AAGGTCATCG CCTGGCTGAA GCTCGAAATA CAGGAAGCGG CCGCGCAGCA CGATCAACCG CGCCTGCTGC GCTGTCGTCG TGATTCGGCA CTGATTCTGC TGGGCTTCTG GCGGGGCTTT CGCAGTGATG AGCTATGCCG TCTGCAAGTG CAGGACATCA AGGCCATCGC GCACTCGGGT ATAACCCTGT ATCTGCCGCG CAGCAAAGGG GATCGTGACA ACCTGGGCAG GACTTATCAG ACACCCGCCT TGCAGCGGCT GTGCCCGGTG CAGGCCTACA TCGAGTGGGT CAACTGTGCG GCGCTGGTGC GCGGTCCGGT GTTTAGAGCC GTTGACCGGT GGGGCAATCT GCAGGAGGAG GGGCTGCATG CCAACAGCGT CATCCCGTTG CTGCGTCAAG CGTTCGAACG CGCAGGCATT GCCGGCGAGC ATTACACCAG CCACTCGCTG CGTCGTGGTT TTGCCAGTTG GGCGCATGCC GCTGGCTGGG ACCTCAAGTC GCTGATGGCT TATGTCGGTT GGAGGGACAT CAAGTCGGCG ATGCGTTACA TTGACGCCGC GCCGTTTCCA GGCAACCCGG AGAGCGGAAT CGGCCTGAAG GTTTCTTCTA TTGATAAGCT GCCTTCATAG
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Protein sequence | MNDVDRYIDA ATRDNTRRSY RAAIEHFEVT WGGFLPATSE SVARYLACHA GTLSVNTLKL RLSALAQWHI SQGFVDPTKA PMVRKVIKGI RALHPAQEKQ AEPLQLQDLE KVIAWLKLEI QEAAAQHDQP RLLRCRRDSA LILLGFWRGF RSDELCRLQV QDIKAIAHSG ITLYLPRSKG DRDNLGRTYQ TPALQRLCPV QAYIEWVNCA ALVRGPVFRA VDRWGNLQEE GLHANSVIPL LRQAFERAGI AGEHYTSHSL RRGFASWAHA AGWDLKSLMA YVGWRDIKSA MRYIDAAPFP GNPESGIGLK VSSIDKLPS
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