Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3106 |
Symbol | gloA |
ID | 1184763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3492265 |
End bp | 3492786 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394464 |
Product | lactoylglutathione lyase |
Protein accession | NP_792898 |
Protein GI | 28870279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | [TIGR00068] lactoylglutathione lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00041709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTGC ACGAACTCAA CACACTACCG GGCGTGACAG CCAACCCTGA AGCGCCTACC CGGCAGTTTG TGTTCAATCA CACCATGCTG CGCGTCAAGG ACATCACCCA ATCGCTGGAC TTCTACACCC GCGTGCTGGG CTTCAGCCTG GTTGAAAAAC GTGACTTCCC GGAAGCTGAG TTCAGCCTGT ATTTCCTTGC CCTGGTGGAC AAGGCACAAA TCCCGGACGA CGACGCTGCA CGCAACGAGT GGATGAAATC GATCCCGGGC ATTCTGGAGC TGACCCACAA CCACGGGACA GAAAGCGATG CGAACGCCTC GTATCACAAC GGCAACAGCG ACCCGCGCGG CTTTGGTCAC ATCTGCGTGT CCGTACCCGA CGTAAAGGTC GCCTGCGAGC GCTTCGAAGC GTTGGGTGTG GACTTTCAGA AACGCCTGTC CGATGGCCGC ATGAACAGCC TGGCGTTCAT CAAGGACCCG GACGGCTACT GGGTAGAGAT CATCCAGCCG ACACCACTCT GA
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Protein sequence | MSLHELNTLP GVTANPEAPT RQFVFNHTML RVKDITQSLD FYTRVLGFSL VEKRDFPEAE FSLYFLALVD KAQIPDDDAA RNEWMKSIPG ILELTHNHGT ESDANASYHN GNSDPRGFGH ICVSVPDVKV ACERFEALGV DFQKRLSDGR MNSLAFIKDP DGYWVEIIQP TPL
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