| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3099 |
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| Symbol | mexE |
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| ID | 1184756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3483136 |
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| End bp | 3484380 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394457 |
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| Product | multidrug efflux RND membrane fusion protein MexE |
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| Protein accession | NP_792891 |
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| Protein GI | 28870272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.165228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGA CACTCAGCCA TCTGCGCTAC CCTCTCACCG CCCTCGCGTT GATCGTGATC
AGTGCGTGCG GCGGCGGCGC GCAACAGGCC GCCACCGCAC CCGGCGCAGC CAAGGTCACC
GTGGCCAAGG TGCTGGAGCA ACCGGTCAAC GAATGGGATG AGTTCACGGG GCGCCTTGAA
GCACCGGAAA CTGTTGAAGT TCGCCCTCGC GTATCTGGCC AGATCGATCA GGTCGCGTTC
ACCGATGGCT CGGTGGTCAA AAAAGGTGAC CTGCTGTTCC AGATCGACCC TCGCCCGTTC
CAGTCCGAAG TCCGCCGTCT TGAAGCCCAG TTGCAACAAG CCCGTGCGGT CGCATCACGT
AGCGACAGCG AAGCCCAGCG CGGTGAGCGT CTGCGCAGCA ACAACGCTAT TTCCGCCGAG
CTGGCCGATT CGCGCAGTAC CTCGGCACAG GAAGCCAAAG CCGGCGTTGC AGCCATTCAG
GCGCAACTGG ACCTGGCCCG ACTTAACCTC AGTTTCACCC GCGTGACCGC TCCGATTGCA
GGCCGCGTGA GCCGTGCCGA GATTACTGCG GGTAACATTG TCACTGCAGA TGTCACTGCA
CTGACCAGCG TGGTCTCCAC CGACAAGGTC TACGCCTACT TCGACGCCGA CGAGCGTGTC
TTCCTCAAGT ACACCGAACT CGCCCGCAAA GGCCAGCGCG GCCAGACCAC GCCGGTCTAC
CTGGGGCTGT CCAATGAAAC CGGCAACCCG CACCTGGGCC AGATGAACTT CGTCGACAAT
CAGGTCAACC CGAGGACCGG CACCATTCGT GGTCGAGCGG TGTTCGACAA CACTGACGGC
AGCTTCACAC CGGGGCTGTA TGCACGGCTG AAACTGGTTG GCAGCGGCAC CTACTCGGCA
GTGCTGATCA ACGACGAAGC GGTCGGCACC GATCTGGGCA AGAAGTTTGT GCTGGTGATG
GACAAGGACA ACAAGCCTGC TTACAGGGCT GTTGAACTGG GCCCGAAAAT CGAAGGCCTG
CGTATTGTGC GCAACGGACT GGCAAAGGAC GACACCATCG TCGTCAAAGG CTTGCAGCGT
GTGCGCCCCG GCCAGCCTGT AGACCCTGAA ATCACCCCGA TGGCCAGCGC CGACACCCTC
GCCGCACTGC AAAAACAACG CCAGGCCCTC GACGCCAGCA CCCAGCCACA GGTGACGTCC
AAAGCCGCCG TCAAAATCGC CAGCGCCTCC GCGCCGCGCG ACTAA
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| Protein sequence | MTQTLSHLRY PLTALALIVI SACGGGAQQA ATAPGAAKVT VAKVLEQPVN EWDEFTGRLE
APETVEVRPR VSGQIDQVAF TDGSVVKKGD LLFQIDPRPF QSEVRRLEAQ LQQARAVASR
SDSEAQRGER LRSNNAISAE LADSRSTSAQ EAKAGVAAIQ AQLDLARLNL SFTRVTAPIA
GRVSRAEITA GNIVTADVTA LTSVVSTDKV YAYFDADERV FLKYTELARK GQRGQTTPVY
LGLSNETGNP HLGQMNFVDN QVNPRTGTIR GRAVFDNTDG SFTPGLYARL KLVGSGTYSA
VLINDEAVGT DLGKKFVLVM DKDNKPAYRA VELGPKIEGL RIVRNGLAKD DTIVVKGLQR
VRPGQPVDPE ITPMASADTL AALQKQRQAL DASTQPQVTS KAAVKIASAS APRD
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