| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3024 |
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| Symbol | gacA |
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| ID | 1184681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3400314 |
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| End bp | 3400958 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394385 |
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| Product | DNA-binding response regulator GacA |
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| Protein accession | NP_792819 |
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| Protein GI | 28870200 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.26082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATTAAGG TGCTAGTTGT CGATGACCAT GACCTTGTTC GGACAGGCAT CACACGCATG
CTGGCCGACA TTGAAGGTCT ACAGGTTGTC GGGCAGGCCG ATTCCGGTGA GGAATCGCTG
AAGAAAGCGC GGGAGCTCAA GCCCGATGTG GTGCTCATGG ATGTCAAGAT GCCCGGCATT
GGCGGTCTGG AGGCAACCCG CAAGATGTTG CGTAGCCATC CTGATATCAA GGTCGTGGCA
GTCACTGCCT GTGAAGAAGA CCCGTTCCCG ACCCGCTTGT TGCAAGCCGG TGCCGCGGGT
TACATGACCA AGGGCGCTGG GCTTGCCGAG ATGGTTCAGG CCATTCGCCT GGTGTTCGCC
GGTCAGCGCT ACATCAGCCC GCAGATTGCC CAGCAACTTG CGTTGAAATC GTTTCAGCCG
CAGGTCAACA ACTCGCCGTT CGATCTGCTG TCCGAACGTG AAATCCAGAT TGCCCTGATG
ATTGTCGGCT GCCAGAAAGT CCAGACCATC TCGGACAAGC TGTGCCTGTC ACCGAAAACC
GTCAATACCT ACCGCTACCG TATCTTTGAA AAGCTTTCGA TCAGCAGTGA TGTTGAACTG
GCTTTGCTCG CTGTACGTCA CGGCATGGTT GATGCCAGCG CCTGA
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| Protein sequence | MIKVLVVDDH DLVRTGITRM LADIEGLQVV GQADSGEESL KKARELKPDV VLMDVKMPGI
GGLEATRKML RSHPDIKVVA VTACEEDPFP TRLLQAGAAG YMTKGAGLAE MVQAIRLVFA
GQRYISPQIA QQLALKSFQP QVNNSPFDLL SEREIQIALM IVGCQKVQTI SDKLCLSPKT
VNTYRYRIFE KLSISSDVEL ALLAVRHGMV DASA
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