Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2903 |
Symbol | |
ID | 1184557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3266662 |
End bp | 3267564 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637394264 |
Product | transcriptional regulator, LysR family |
Protein accession | NP_792701 |
Protein GI | 28870082 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0770921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATATA TAGCCACGCA ATACGAGATC AACCATGCCG ACCTTGCTCT GGTGCTGGCA CTGGTTCGCG GCAGAACCCT GGCGCGTGCT GCCGAACTGC TGCAGGTCGA TATTTCCACC GTATTTCGCT CCATCCGCCG CCTTGAAGCT TCACTTGGCG CAGCACTGTT CGAAAAGAAC CGGCGTGGCT ACATCCCCAC CGACACCGCC CAGGCAATGG CCGAACAGGC AGAACACGCC GAACTGGCCC TCGCAGCAGC ACGGGTTGCC CTGCAACAAG GTGAGCATGT GATCAGCGGC ACGGTTCGCC TGACGTGTAC CGATGCCGTG CTGCACAGCC TGCTGTTGCC GGCGCTCGCC GAATTCATGC CCCAGTACCC TGCCCTCACC CTGGAGCTGG CCACCTCCAA TGCCTTTGCC AACCTCAGCC GTCGGGATGC CGATATTGCG CTGCGCCTCA CCAATACGCC GCCAGAACAC CTGATCGGGC GGTGCCTGGG GCGTGCCGAA TACGTGATCT GCGGTCGCCC CGAGTTCCGC GAGGCGCTGG AGCACAATCC CGCTTCGGTT CCCTGGATCA GCCCGGACGA CTCGATGCCG GATCACCCCT CGGTGATCTG GCGCAAGCAG GTTTTCCCCG CCGTGATCCC GCGTTATCGC TGCAGCAACA TGTCGGCCGT GGCGCAGCTG GTCGCGGCTG GACTGGGCGT GGCGGCACTG ACCGACTTCA CCGCCAGAGG TCTCGTCGGC GTCGAGCACC TGAGCGAGCC GTTGCAAGGC TGCAGCACCG ACCTGTGGCT GCTGACCCGC CCTGACTGTC GCGCACTGCG CTCCGTTCAG ACCCTGATCG AGGCGCTCGC GCCCCTGTTG CGGGCAGCGC TGGCAGCCGA GCAAGCTCGC TGA
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Protein sequence | MQYIATQYEI NHADLALVLA LVRGRTLARA AELLQVDIST VFRSIRRLEA SLGAALFEKN RRGYIPTDTA QAMAEQAEHA ELALAAARVA LQQGEHVISG TVRLTCTDAV LHSLLLPALA EFMPQYPALT LELATSNAFA NLSRRDADIA LRLTNTPPEH LIGRCLGRAE YVICGRPEFR EALEHNPASV PWISPDDSMP DHPSVIWRKQ VFPAVIPRYR CSNMSAVAQL VAAGLGVAAL TDFTARGLVG VEHLSEPLQG CSTDLWLLTR PDCRALRSVQ TLIEALAPLL RAALAAEQAR
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