Gene PSPTO_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2852 
Symbol 
ID1184506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3203321 
End bp3203902 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content55% 
IMG OID637394217 
Producthypothetical protein 
Protein accessionNP_792654 
Protein GI28870035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000162533 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATT TAATTACCCC TTCCGGGGCC TCGCGGCTGG TCAGCAAGGC CTCGCGGATG 
GGCAGTGGTG GCGATTTCCT GTTGCCATTT CCTGACTATC CCAGCAACGC ACGCTGTTTT 
GTTCACTTGG ACGCTCGTTT ACTGCCTTAC TGGCACACGC TGTTTGATGT TTGTCCTAGG 
TTGCTGAAGC TGGATCCTCC CGATGGCTTG AATATATTTC GCAGCTTTAT GACGTGGGCT 
TACCGTAACC ATCCACCGCT GAACTGGACT TACTACCTCA GTGTTTGTCG CTGGTTACTG 
ACCTCAACCT ACCAGAAGCA AATAAGTGAG GAGCACATCG ATGCCTTCAT GACTGCAGCG 
GCCGCCCGCT GGATAAGCAC AGATGGTAGC CAGGCTAGGG GACTGGTGTT GGCTTGGGAA 
GGTTCTCCGA TGAGGGTGTT TGACTGGAAA ATAGCTCCAC GTTCAGGCGT AGGCTTTGAC 
CCTGAACAAG AGGAGTTTCC ACCTACGCCT TGGGACTTCG CCTGGTGTCC TTTGACAGGG 
AAGGGGGGCG CTGGATTTCG CCGCTGGTTG CCCATCCCCT GA
 
Protein sequence
MRDLITPSGA SRLVSKASRM GSGGDFLLPF PDYPSNARCF VHLDARLLPY WHTLFDVCPR 
LLKLDPPDGL NIFRSFMTWA YRNHPPLNWT YYLSVCRWLL TSTYQKQISE EHIDAFMTAA 
AARWISTDGS QARGLVLAWE GSPMRVFDWK IAPRSGVGFD PEQEEFPPTP WDFAWCPLTG 
KGGAGFRRWL PIP