6 homologs were found in PanDaTox collection
for query gene PSPTO_2852 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2852  hypothetical protein  100 
 
 
193 aa  397  9.999999999999999e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.000162533  n/a   
 
 
-
 
NC_004578  PSPTO_2844  hypothetical protein  71.78 
 
 
180 aa  257  8e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  hitchhiker  0.00191455  n/a   
 
 
-
 
NC_002947  PP_3335  hypothetical protein  63.78 
 
 
200 aa  246  2e-64  Pseudomonas putida KT2440  Bacteria  normal  0.813624  normal 
 
 
-
 
NC_010322  PputGB1_3177  hypothetical protein  59.89 
 
 
197 aa  211  3.9999999999999995e-54  Pseudomonas putida GB-1  Bacteria  normal  0.454826  normal 
 
 
-
 
NC_008463  PA14_15130  hypothetical protein  40.26 
 
 
190 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.349048  hitchhiker  0.0000884874 
 
 
-
 
NC_009656  PSPA7_1331  hypothetical protein  40.26 
 
 
190 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
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