| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2827 |
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| Symbol | |
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| ID | 1184481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3151403 |
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| End bp | 3151645 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394194 |
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| Product | hypothetical protein |
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| Protein accession | NP_792631 |
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| Protein GI | 28870012 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00024785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTTACG ATTTCATCGA CATTCATGGC CAGCCAGCGG TCAACACCAT TCAGGGCAGG
GTGATCGGCC TGACCGTGCA GGAGCTGTTT CGCATCCCGG ACGTGGTGGC CATCGCCAGT
GAAAACACCA AGGCGGCGGC GACATTAGGG GCTTTGCGCT CGGGCGTGAT CAACACACTG
GCGACAACGG TCACCAACGC CCACACCATC CTTGCCCTGG ATGACGCGAC GCGCAAAGGC
TGA
|
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| Protein sequence | MGYDFIDIHG QPAVNTIQGR VIGLTVQELF RIPDVVAIAS ENTKAAATLG ALRSGVINTL
ATTVTNAHTI LALDDATRKG
|
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