Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2702 |
Symbol | xylB |
ID | 1184356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2996807 |
End bp | 2998288 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394072 |
Product | xylulokinase |
Protein accession | NP_792509 |
Protein GI | 28869890 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0029542 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTTG GAATCGACTG TGGCACACAG GGCACCAAGG TGCTGGTGCT CAATGCCGAA AGCGGCAAGG TACTGGGCGA AGGTTCAGCA CCCCATAGCC TGATCAGCGA CCATAACGGC CGCCGTGAGC AGGACGTCCA GCAGTGGCTG GACGCACTGC AACAGGCGAC CCGCGATGCC TTGGCGCAGG CGGGCGTGTC AGGGCAGCAG ATTCAGGGCA TCGGTGTTTC GGGCCAGCAA CATGGCCTGG TGCTGCTTGA TGCTCAAGGT GAAGTGCTGC GCCCGGCCAA ATTGTGGTGC GACACCGAGT CCGCCCCGGA AAACCAGCGT TTACTGGATT ATCTGGGCGG CGCACAGGGT TCGCTGCAAC GCCTCGGTCT GGTCATCGCG CCGGGCTACA CCGTGTCCAA GCTGTTATGG ACCAAAGAGC AGCACCCACA GGTGTTCGAG CGTATCGACA AGGTGCTGCT GCCCCACGAC TACCTGAATT ACTGGCTGAC CGGGCGCTGC TGCACCGAGT TCGGCGACGC GTCGGGCACT GGTTATTTCA ACGTGCGCAG CCGCGAGTGG GACCTGCCAT TACTCGCCCA TATCGACCCT AGCGGACGGC TGGGCAAAGC GCTGCCTCAA TTGCTTGAGG CCGACGCGCC GGTTGGCACG CTGCTTCCCG ACATCGCCCG GCTGCTGGGC CTCAACCCGG ACGCCCTGGT GTCCAGTGGC GGCGGCGACA ACATGATGGG CGCGATTGGC ACCGGCAACA TTCAGCCAGG GCTGATCACC ATGAGCCTGG GCTCGTCGGG CACGGTGTAC GCTTATGGCG ATGAGGTGCG GGTCAGCGAA CATGAGTCGG TCGCCACGTT CTGTTCGTCG TCCGGCGGCT GGCTGCCGTT GATCTGCACC ATGAACCTGA CCAACGCGAC CACGGCCATC CGCGAGCTGT TCGCCCTGAA CATCAAGGAT TTCAATCAGG CCATCGCTCA GGCACCGATC GGCGCAGAAG GCGTGTTGAT GCTGCCGTTT TTCAATGGCG AACGCGTGCC CGCCCTGCCC GACGCTACCG CCAGCATCGT CGGGCTGGAC AGCACCAACC TGACCCAGGC CAACCTGTGC CGCGCCGTGG TCGAAGGCAC CACGTTCGGC TTGCGCTACG GCCTGGACCT GCTGCGCGAC AGCGGCATCA AGAGCGAGAA GATCCGGCTC ATCGGTGGCG GTTCGAAAAG CGCAGTGTGG CGACAGATCG TCGCAGATAT CATGAACACC CCGGTCATCT GCACCGTGCA GCCGGAAGCC GCCGCGCTGG GCGCGGCCAT TCAGGCGGCC TGGTGCCGGT CGAAGGCTGA CGGTACGCCC GAGGCGCTGC TACAGCTGTG CGAACGGTGC GTAAGCCTCG ATCCAGACAG CGAGACCCAC CCGGTTGCGC AGAACGTGGC AACCTATCAG CAGGTCTATC AGCGTTATCA GGCGCAATTG CGCAAGGTTT GA
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Protein sequence | MFLGIDCGTQ GTKVLVLNAE SGKVLGEGSA PHSLISDHNG RREQDVQQWL DALQQATRDA LAQAGVSGQQ IQGIGVSGQQ HGLVLLDAQG EVLRPAKLWC DTESAPENQR LLDYLGGAQG SLQRLGLVIA PGYTVSKLLW TKEQHPQVFE RIDKVLLPHD YLNYWLTGRC CTEFGDASGT GYFNVRSREW DLPLLAHIDP SGRLGKALPQ LLEADAPVGT LLPDIARLLG LNPDALVSSG GGDNMMGAIG TGNIQPGLIT MSLGSSGTVY AYGDEVRVSE HESVATFCSS SGGWLPLICT MNLTNATTAI RELFALNIKD FNQAIAQAPI GAEGVLMLPF FNGERVPALP DATASIVGLD STNLTQANLC RAVVEGTTFG LRYGLDLLRD SGIKSEKIRL IGGGSKSAVW RQIVADIMNT PVICTVQPEA AALGAAIQAA WCRSKADGTP EALLQLCERC VSLDPDSETH PVAQNVATYQ QVYQRYQAQL RKV
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