Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2629 |
Symbol | |
ID | 1184281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2921165 |
End bp | 2921953 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393998 |
Product | amino acid ABC transporter, permease protein |
Protein accession | NP_792437 |
Protein GI | 28869818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0506299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTG ACTCGTCACT CGCCACGCCG CCCGCCTGGC CGCGTCGCCG CCTGGTTACA GTGAGCCTGG CAGTGCTGTT GGTGAGCGCG CTGTTTTATT GGGCGTCTGG ACGCCCGATA TTCAACGCTT TGGTGCAGTG GTCGCCCGCA CTGGCGGGCG GTTTTGCGCA GAACATTCTG ATCAGCCTGG TTGCCATCGG CCTGGGCTCG GTGTTCGGTC TGCTGGTCGG GGCGCTGGGG CTTTCGCCGT TCCGCTTGCT GCGTTTGCCA GCGCGTCTGT GGGTGCAGGT CTTTCGTAAT GCGCCGTGGC TGGTGTTGAT CTACTTCACC ACTTATGTGT TCCCATTCGA GATCAAGATT GCCGGAACCT ACATCGCCTT TCCTGACTGG GTGAAAGTCA CCCTCGGCCT GGCATTGCCT GCCAGCGCCA ATGTGGCCGA GATCTTTCGC GGCGCAGTGG CCTCTATCCC CAGCACCCAG TGGGAGGCTG CACGTTCGCT GGCCTTCACG CGGGGGCAGA TTTTTCGCTC GATCATCCTG CCGCAGTGCT TCAAACGCAT GTTGCCGCCG TGGATGAACC TGTACGCGGT GATCACCATG GGCACGGCGC TGGCGTCGCT GGTGGGCGTG CATGATGTGA TCGATACCGC GCAGATTGCC AGTAACACGG TCAACCAGAC CGGTTTCACG GTGGTTATCT ATTGCAGCCT GCTGGTGCTG TTCTTCGCTT ATTGCTACCC CATTTCCCGT CTGACTCACT ACCTGGAGCG ACGCTATGCC TTCCATTGA
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Protein sequence | MAIDSSLATP PAWPRRRLVT VSLAVLLVSA LFYWASGRPI FNALVQWSPA LAGGFAQNIL ISLVAIGLGS VFGLLVGALG LSPFRLLRLP ARLWVQVFRN APWLVLIYFT TYVFPFEIKI AGTYIAFPDW VKVTLGLALP ASANVAEIFR GAVASIPSTQ WEAARSLAFT RGQIFRSIIL PQCFKRMLPP WMNLYAVITM GTALASLVGV HDVIDTAQIA SNTVNQTGFT VVIYCSLLVL FFAYCYPISR LTHYLERRYA FH
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