| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2606 |
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| Symbol | |
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| ID | 1184258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2896523 |
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| End bp | 2897461 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393976 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_792415 |
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| Protein GI | 28869796 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.177671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTCA ATCATTATTG CGCTGACTAC GAGCTGCCCA AGGTTCTGAC CGATGAAGTG
GGTGATGAGC TTGATATCCG GCTCATTGAC TGGCAGGTCG ACGAAGACCG GCATCTGGAT
GCTTTCTGCG AAGCGTCGCT GACCGTCTCG TACCACGCCA ACTGCTCGGG TTGGCGTTAT
TTCGCCGACA CCTCGCCCCT GAGCTGGCGT GAAGATCACT GCTGCCTGTT CCATTCGACG
GTTCCGGTCA GAGGCGAGGG TTTCGTACCC GCTGGCACCT GCTGGCGCGG TGTGAATATC
AGTTTTGCCG CGCACCGATT GGGCATGCTC GATCTGGCCG GGCAACTGTT CGATTATCAG
GGGCCTTGGG AAAACACCCG TTCTCAGGAT CGCACGGCCC GGCTTGTGCA GTTTCCGGCA
CCCCAGGTGG TAAGACGGAT CGGCCAGGAA ATGCTCGGCT GCAAGCTTGA AGGGATCGCC
AGGGATTTGC TGCTGCGTGG CAAGGCCTAT GAAATGCTTG GCCAACTGAC GGCTCATATT
CAGGACCTGG CCCATTTCAC CGGGCTCAAC GCGGGGGGCC GTGACCTGAT GCGCGTCGAA
CGGGCGCGCA AGCTGCTGGA GGCGCACCCC GAGCAGGACT GGACCATCGA ATCACTGGCC
CAGTCGGTGG AACTCAACAC CAAAAAGCTC AAGCAGGGGT TTCGTCAGAG CTACGACAGC
GGCGTCTACG GCTATCTGCA GAAAGTCCGC ATCGAGCGGG CGGCGCAACT GTTGAAGCAA
CAGGGGGCGG TCAGCGAAGT GGCGGCGGCA GTGGGTTATT CCAGTGCCAG CCATTTCGCC
AAGGTGTTTC GCCGCTACTA CGGCATCAAC CCACTGCACT TCAGCGCAAT GGCTGCCGAA
CAGGTCCATG AACAGGCTGT GGTCCTGCCC GCAGGCTAA
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| Protein sequence | MSLNHYCADY ELPKVLTDEV GDELDIRLID WQVDEDRHLD AFCEASLTVS YHANCSGWRY
FADTSPLSWR EDHCCLFHST VPVRGEGFVP AGTCWRGVNI SFAAHRLGML DLAGQLFDYQ
GPWENTRSQD RTARLVQFPA PQVVRRIGQE MLGCKLEGIA RDLLLRGKAY EMLGQLTAHI
QDLAHFTGLN AGGRDLMRVE RARKLLEAHP EQDWTIESLA QSVELNTKKL KQGFRQSYDS
GVYGYLQKVR IERAAQLLKQ QGAVSEVAAA VGYSSASHFA KVFRRYYGIN PLHFSAMAAE
QVHEQAVVLP AG
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