| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2598 |
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| Symbol | irp4 |
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| ID | 1184250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2871864 |
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| End bp | 2872679 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393968 |
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| Product | yersiniabactin synthetase, thioesterase component |
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| Protein accession | NP_792407 |
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| Protein GI | 28869788 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.494372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCA ATTGCGGGCG GAGGGTTGAT CGCATGGATG TGGGTATGGA TGCAGGTATG
TTGCGCCCTT TTCTGCGCGC CGATCAGTGC CAGCCGCATG TGCTGCTGTG CCCGTTTGCC
GGGGCCAGCG GTGGCGCCTT TCATCACTGG CGCGAGCTCG ACGAGCCGGG CCTGAACCTG
ACGCTGGCGA TCTATCCGGG GCGTGACCAG CGCATGCACG AGCCCTGCCT GCGTCAGGTT
CAGCCACTCG CCGACAGCCT TGCCGCAGAC ATTCAGGCCA TGCCGGATGC ACAACGCCGC
CCCCTGATAC TGGCCGGGCA CAGCATGGGC GCGCAGGTCG CCTTCGAAAC CTGTCTGTTG
CTGGAACAGG CCGGTACGCC ACCCGCAGGG CTGGTGTTAT CGGCCTGCCA TGCCCCCCAC
CTGACTGGTA GGCGCCTGCT CAGCCATCTG GATGACCGGC GCTTCATCGA ACAACTGGTT
GCCATTGGCG GTGTCAGCGA CGCCTTGCTG GCGAATCCGG ACCTGCTGGC GTTGTTCATG
CCCTTGTTGC GGGCCGATTT CCAAGCCACG GAAAGCTATT ACCGCCCGCT GCAGGCAGAT
CGTCAGCGCT TGCAGACACC GACGCTGTTG CTGCACGGCA GTCACGACCC CGAAGCCGAT
CAGGAGGAAG TCAGCGCCTG GCGGCAATGG CTGTGCGGCG ACTGTCGGCA ACAGGTCATG
GCCGGCGACC ACTTCTACCT GACGCAACGC CCCAGAGCCT TCGCTGCACA GGTCCTGAAC
TTCATCGAAC AGAGCATCAG CCCTTTCCAT CCGTAA
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| Protein sequence | MPRNCGRRVD RMDVGMDAGM LRPFLRADQC QPHVLLCPFA GASGGAFHHW RELDEPGLNL
TLAIYPGRDQ RMHEPCLRQV QPLADSLAAD IQAMPDAQRR PLILAGHSMG AQVAFETCLL
LEQAGTPPAG LVLSACHAPH LTGRRLLSHL DDRRFIEQLV AIGGVSDALL ANPDLLALFM
PLLRADFQAT ESYYRPLQAD RQRLQTPTLL LHGSHDPEAD QEEVSAWRQW LCGDCRQQVM
AGDHFYLTQR PRAFAAQVLN FIEQSISPFH P
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