| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2576 |
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| Symbol | |
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| ID | 1184228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2845146 |
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| End bp | 2846666 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393947 |
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| Product | peptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | NP_792386 |
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| Protein GI | 28869767 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATCA AGGGTTTCGC TCGCAGCATC GCGCTATTGA GCCTGTTCAG CAGTTTTTCC
GCCCTGGCCG GCAAGGCCGA CGACACACTG GTCTACGCCT CCGACAGCGA ACCGGAAAAC
ATCAGCCCCT ATCACAACGA TTTGCGCGAA GGCGTGATTC TCGGCCGCCT GATCTGGGAC
AACCTGGTCT ACCGCAACCC CGATAACGGC CAATATGAAC CCATGCTGGC CACCAGCTGG
AAACAGGTCG ATGACACCAC CATAGACTTC CAGCTGCGTG AGGGCGTGAA GTTCCACAAT
GGCGACCCGT TCACTGCCGA TGACGTGGTG TTCACCCTCA ATTACGTGGT GTCGCCCGAG
TCCAAGGTGG TCACGGTACA GAACGTCGAC TGGATCAAGA GCGCCGAAAA GCTCGGTGAC
TACAGCGTGC GCCTGCACCT GAAAAAGCCC TTCCCGCCTG CGCTGGAATA CCTGTCCAAC
GCCGTACCGA TGTTCCCGAA AAAGTATTTC GAACAAGTCG GCATAGCCGG ATTCAGCCGT
AAACCGATCG GCACCGGGCC TTACAAGGTC ACGGCCATCG CCACCGGCGA AGGCGTGAAG
ATGGACAAGA ACCCCGACTA CTTCAAGGAC AGCCCACAGG GCCAGCCGAA GATCGGTCAT
ATCAACTTCC GGGTCATCGC CGATGCCGAA ACGCGACTGG CCGAGCTGAT GACTGGCGGC
ATCGACTGGA CCTGGCGCGT AGCCCCCGAC CAAGCGGAAA ACCTCAAGGC CATGCCCAAC
CTGGTGGTCA CCAGCGGCGC GACCATGCGC ATCGGCTTTC TGATTCTCGA CGCGCGTGGC
ACCTCGAGCG CCGATTCGCC GATGAAACAC CTGAAAGTAC GGCAGGCGAT CAACTACGCA
ATCAACCGCG ACGGCCTCGC CTCGCAACTG GTCGGCGGCG AGAGCAAACC GCTGCAGGTC
GCCTGCTACC CTGGCCAGTT CGGCTGTGAC ACCACGGCCG CCACGGTCTA CAACTACGAC
CCGGCCAAGG CCAAGGCACT GCTCGCCGAA GCCGGTTACC CGAACGGTTT CGAAACCGAA
ATCTTCGCCT ACCGGGACCG CGACTACGTC GAAGCGATCA TCGGCAACCT ACGCGCCGTG
GGCATCAACG CCAAGCTGCG TTACCTGAAA TACGCCGCCC TGCGTGACCA GCAGCGTGGC
GGCAAGGTGC CGATGTCGTT TCAAGCCTGG GGCTCGTTTT CGATCCTCGA CACCTCGGCC
TCGGCCGGGA CCTGGTTCAA GGGCAACCCC GACGACAACA TCAAAGACCC GCAAGTCCAG
GGCTGGCTGC AGACCGCCGA CAACGCGCTG GACCCGCAAG TGCGCAAGGA CAACTACCGC
AAGGCCTTGC AGCGCATCAG CGAGCAGGCG TACTGGGCGC CGTTGTTCAA CTACTCGATG
AACTACGCCT ACGTCTCGGA CCTGAACTTC AAGCCTTACC CGGACGAGCT GCCACGTTTC
GTGCTGTCGA GCTGGAAATA G
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| Protein sequence | MGIKGFARSI ALLSLFSSFS ALAGKADDTL VYASDSEPEN ISPYHNDLRE GVILGRLIWD
NLVYRNPDNG QYEPMLATSW KQVDDTTIDF QLREGVKFHN GDPFTADDVV FTLNYVVSPE
SKVVTVQNVD WIKSAEKLGD YSVRLHLKKP FPPALEYLSN AVPMFPKKYF EQVGIAGFSR
KPIGTGPYKV TAIATGEGVK MDKNPDYFKD SPQGQPKIGH INFRVIADAE TRLAELMTGG
IDWTWRVAPD QAENLKAMPN LVVTSGATMR IGFLILDARG TSSADSPMKH LKVRQAINYA
INRDGLASQL VGGESKPLQV ACYPGQFGCD TTAATVYNYD PAKAKALLAE AGYPNGFETE
IFAYRDRDYV EAIIGNLRAV GINAKLRYLK YAALRDQQRG GKVPMSFQAW GSFSILDTSA
SAGTWFKGNP DDNIKDPQVQ GWLQTADNAL DPQVRKDNYR KALQRISEQA YWAPLFNYSM
NYAYVSDLNF KPYPDELPRF VLSSWK
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