Gene PSPTO_2535 details

Gene Information

• Locus tag: PSPTO_2535
• ID: 1184187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 2797493
• End bp: 2800933
• Gene Length: 3441 bp
• Protein Length: 1146 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637393908
• Product: hypothetical protein
• Protein accession: NP_792347
• Protein GI: 28869728

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.54787
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACCG TCAGAAAACC CATAACACCA CGGATGCTCA GCATGACCGA TAAAAACGGC 
ACCCATCGAC AACGACGTGC TGCACTGTTC CCCAAAACCC CGGCGACCGC CACCAGCCTG 
TGCCCTTTCA GAGGGCCTAA TATCGCCATC GTCCCGGTGC GCTATGCGCT GGATCGCTCG 
CGCTATGACG CTGACCCCGC GCAACTGAAG CCACTGCCCA AAGACGGCCA ATGGGCCCAC 
CTGCCGACGC TGAAAACTCG CAGTTACACC TTACGCCAAC TGTACGACGG CTACGTTTAC 
GTGTTCGACG AAACGGCCGG CACGTTGCAC GAATACGCAG CCTCAGCCAG CGACGGCCAT 
CTGAGCCGCA TCGTCTGGAC CGATGCACAC ATCGGTAACG ACCAGCGAAG CGGTGCCGGT 
GAAGGGCAAC CCTTTGTGCT TTACCCGCGT GACCACCGCC TGCACATCGC CTTTTCTCCC 
CTGCAATGGA CATGGCGAAT GTGCGAGCAC ATGCGCTCCC ACGCCCCAAG CCGCGCGTTG 
TGGATGAAGG CGCTGGACCT GGCCAGCTAC TGCCTCACCA TGGCCGAACC GGACACCCTG 
CCGCTGGATC GCATCGCCGA GGCCGTGGCG GATATCGACA AAGACTGTGT TGTGGAAGAT 
GGCCGTTTTG CAGATTCGGC GATTCCCAGT GTTCGCCCGC CATCAGAAGG TGCAGAACCC 
TATCCGTTAT GGGCACCGCT GGGCGCCGAT GTCTTCTGGC AGGGCAGCGT CTACGATCAG 
GACAGCTCTC TGGTCATTGC CCTCAATGAC CCGCTCGCCG TTTTCAACGA CTTGGGCATG 
CAGCTGGCGG CCGATCAGGC GGCTTTTCGG GAATGGCAAA GCGCCCACGA ACACAAGATC 
CAGATTGCCC AGACCGTCGC CACGCTGTGC GGTGCAGAGA GCGAAGCAGA GAAGCTGCCA 
GCATCGGTGC GCGGTGATGC GCTGCGCACG CATCAGTACC TGAGCGAGGT CGAAGCCTAC 
TTTGAACAAT GCATTCTTGA AGAAGCACAG ATCAGCAGTA GCAACGTTCC TGGAGATTTT 
CTGCTGCTGC CGGACATGTT CAAGAGCCTG GACATGCGCA AATCGATCGA AACACGTTAT 
GGCAGCGCGC CGACCGATGA GGGCGCGCAG GCCTGGAAAG ATCGCCACAA ATGGCGGCGC 
GAGGTCGATC TGAGCAGTGC GCGTCAGTAC CTTTTGCAGC ACCTGCCGAC CGGAGACAAA 
CGCCTGCAAC AGGTGCGTGA CACGCAAAGC GATTTCCAGC ACTGGGCGGC ACATATAGGC 
ACCGAACCGC TCAAGCTGTT CATCGACACC ACACACCCGA AAACCCTGCT GTATTTGCAG 
ACGATCATGC TCAATCTGCA GATCATCTAT GCGCAGGACA GCGCCGCAAA TGCCTGGCTC 
GCCGAGCAGG AAGCCAACAC CAGCAGCCTG TTTGGCACCC TGCGTTATGG TTTTTCGCCA 
GCGCTCAAGC ACGCCCTGCA TCAGGAAGCC GACGCACTGC TGAACGGCCT CGGCGACGTC 
ACTAATCTGG CCACGCGCAT CGGTGAACTC AATGGCGTGC TCAACCATCA GGGTTTTGCC 
GACAAGCCGT GGATGAAGGC GCTGAAACAG CCTGTTCAAG ACACCTTCAA AGCCCTCGGC 
GAACTGGCCA GCGGTGCCGG CAAAGCCAGG TTTGAAAGTG TATTACTGGC ATGGGTGCCC 
ATCGACAGCC GCATGGCCCT TGGCAAGCAG CAGAACATCG TTGCGTTGCT TCGCACCCTG 
CTGATCGGCC AGATATTGCT CGACTCGACA GCACGCGTCG CGATCAATGA GCAGACAGTG 
ACCAAGCTCA AACAGTGGGT AAGTGAGTGG CAAGTCCTCA ACAAGCAAAT CAGCGAGCTG 
GTGCGCAGTT GGCAATACCC GAACGCCTAC AACACGCGCC AAAGCACCGC TCGCAAATTG 
CAGGCCCATA AACACAAACT GCGCGTTCAC GAACTGAGCA TCCCTGCCCT GCTCGACTTT 
CAGAACAACG AATACGCCAA GCTATTGCAG GACGAGATTC GTCAGTACTT CCAGTCTGGC 
AAAACCCTCG CCACGGACTG GCTCGCCCGC GCCAAAGGCT GGACCGACCG ACTGGGCGGC 
GTTGCTGGCA CGATCACCTG GGGCGTGGTC ATGCTTAACC TGATCAATAC CGCCTTCCTC 
TATCGGGACC TTACCCGGGA CGGGGATTTC AGTACCAAGG ACATTGGCAA GGTGACGTAT 
GGATTGGGGT ACAGCTTCAA TCTGTTGATG GCGGTGTTTG TGGACGCGCC GTGGAGCATC 
ATAAGGGACG CAACGCCAGC GCTGATCGAT GGCAAGAATG TGGCCATTCT GGACAGGTCC 
AGTGCGTACT GGAAAGCCAA GGGAAATGCA GCGTGGGGTG ATGCGATACG TGGGTTCAGG 
GTTTCGATGG TGGCGATGGG TGGGTTTGGG CTTGCGGCGG TTACGCTTGA ATTATTTGAT 
GTTACAGATG ATTTTCACGC AGCTAAAACA TCAGAAGAAA CATATGGAAT TGGCATCAAG 
GGGTTTTCCG TAGTGGTGAT GGGATTGGGT GCTGCGGCCC AGCTAATGGC AGGCATTTCT 
CCCGCTGGCG TTTTTACGAT TATCGCAATG AGTCCGTGGT TCAGCGTAGC GCTACTGGCA 
GCAGGCTTGA TTTATCTTTT TGCTACGATG GCCCTTAATT ACTTCAAGCA AGACAGTGTC 
GGCTGGTGGC TACGCAAGTG CTGTTGGTCC ATAACCCAAG ACTATCGCTA TGCTGAGACT 
GCGGAAGGTA AGCATGACGA AGTGCGCGCG CTGATGGAAA TAAAATTATC TCCGCAGGTC 
CATGTAAAAA GCACCGTGAA TTATGAAAAC CGTTATCTTG GCAAAAACGA TCACTACAGC 
GTAGCGGTAC AAAATGGCGC GGGGGTACAA GTGCGCTTGC CGAATCTTCT ACGCGGGCTG 
TCCGTGCATT TCAATATCGT TAGTAGCAAG AGACCATGGG GCGTGCTGCC CGTAGAAAAA 
ATAGATCAGC CGATACATGA AGCTTTTCTG GACCACGGGC AATTCAGGAA AGTCGAACAG 
TTCGGGATGT TTACCAACAA GCCTGCTGGC AAGGCGAGTG AAGACTATAC CTACCCCCGC 
ATGCCACCTG AAAACGAAGA CCTCATCTGG GAAACCTGGG TGCCGCTCGA CAAGGACGCA 
ACGTATCTTG AGTTGCAAAT CTGGTACCCG GCCAATCTTT TAAATCCTGG CGGAGACGAT 
AGAAGCTATC TGTTTCAGAT GGAGCTTGGC ACAAAAGGCG ATACCGCTAT TGACGGCCTG 
GCTGCAGTGG AACTCGAGGT AAAGGCATCA AGCAGGATTG GCGCTCTGAC CCTAGAAGTC 
GCAGAGGGCA CACCTGTATG A 

 

Protein sequence

MNTVRKPITP RMLSMTDKNG THRQRRAALF PKTPATATSL CPFRGPNIAI VPVRYALDRS 
RYDADPAQLK PLPKDGQWAH LPTLKTRSYT LRQLYDGYVY VFDETAGTLH EYAASASDGH 
LSRIVWTDAH IGNDQRSGAG EGQPFVLYPR DHRLHIAFSP LQWTWRMCEH MRSHAPSRAL 
WMKALDLASY CLTMAEPDTL PLDRIAEAVA DIDKDCVVED GRFADSAIPS VRPPSEGAEP 
YPLWAPLGAD VFWQGSVYDQ DSSLVIALND PLAVFNDLGM QLAADQAAFR EWQSAHEHKI 
QIAQTVATLC GAESEAEKLP ASVRGDALRT HQYLSEVEAY FEQCILEEAQ ISSSNVPGDF 
LLLPDMFKSL DMRKSIETRY GSAPTDEGAQ AWKDRHKWRR EVDLSSARQY LLQHLPTGDK 
RLQQVRDTQS DFQHWAAHIG TEPLKLFIDT THPKTLLYLQ TIMLNLQIIY AQDSAANAWL 
AEQEANTSSL FGTLRYGFSP ALKHALHQEA DALLNGLGDV TNLATRIGEL NGVLNHQGFA 
DKPWMKALKQ PVQDTFKALG ELASGAGKAR FESVLLAWVP IDSRMALGKQ QNIVALLRTL 
LIGQILLDST ARVAINEQTV TKLKQWVSEW QVLNKQISEL VRSWQYPNAY NTRQSTARKL 
QAHKHKLRVH ELSIPALLDF QNNEYAKLLQ DEIRQYFQSG KTLATDWLAR AKGWTDRLGG 
VAGTITWGVV MLNLINTAFL YRDLTRDGDF STKDIGKVTY GLGYSFNLLM AVFVDAPWSI 
IRDATPALID GKNVAILDRS SAYWKAKGNA AWGDAIRGFR VSMVAMGGFG LAAVTLELFD 
VTDDFHAAKT SEETYGIGIK GFSVVVMGLG AAAQLMAGIS PAGVFTIIAM SPWFSVALLA 
AGLIYLFATM ALNYFKQDSV GWWLRKCCWS ITQDYRYAET AEGKHDEVRA LMEIKLSPQV 
HVKSTVNYEN RYLGKNDHYS VAVQNGAGVQ VRLPNLLRGL SVHFNIVSSK RPWGVLPVEK 
IDQPIHEAFL DHGQFRKVEQ FGMFTNKPAG KASEDYTYPR MPPENEDLIW ETWVPLDKDA 
TYLELQIWYP ANLLNPGGDD RSYLFQMELG TKGDTAIDGL AAVELEVKAS SRIGALTLEV 
AEGTPV