Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2506 |
Symbol | |
ID | 1184158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2768415 |
End bp | 2768723 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637393879 |
Product | lipoprotein, putative |
Protein accession | NP_792318 |
Protein GI | 28869699 |
COG category | [S] Function unknown |
COG ID | [COG5455] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0591914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAGCA AATCATTGAT CGCCTGCATG ACCTTGCTCG GCTGCTTCTG CGCCGTCACC CTGCCGGTTC ACGCGGCAGA GGCGCCAGAA CCGAAAGTGA CCGAGTCCAA GGACAACGTT CACGAACTGG AAGTGGGCTC CCGCGTGCCG GAGAAGTACC GCCGAAGCGA TCTTGAGGTC AAGGACTGGA AAAGCAAGGG CCTGGAAGCG CCCGCCAAGG AAAGCGAGTG GGTGAAGATC AATGACAAAT ATGTGCGATT CCAGAAGGTC AATGGCCAGA TAATGGATAT CGTGCCGGTG AAAAAATAA
|
Protein sequence | MNSKSLIACM TLLGCFCAVT LPVHAAEAPE PKVTESKDNV HELEVGSRVP EKYRRSDLEV KDWKSKGLEA PAKESEWVKI NDKYVRFQKV NGQIMDIVPV KK
|
| |