Gene PSPTO_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2506 
Symbol 
ID1184158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2768415 
End bp2768723 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content55% 
IMG OID637393879 
Productlipoprotein, putative 
Protein accessionNP_792318 
Protein GI28869699 
COG category[S] Function unknown 
COG ID[COG5455] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0591914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCA AATCATTGAT CGCCTGCATG ACCTTGCTCG GCTGCTTCTG CGCCGTCACC 
CTGCCGGTTC ACGCGGCAGA GGCGCCAGAA CCGAAAGTGA CCGAGTCCAA GGACAACGTT
CACGAACTGG AAGTGGGCTC CCGCGTGCCG GAGAAGTACC GCCGAAGCGA TCTTGAGGTC
AAGGACTGGA AAAGCAAGGG CCTGGAAGCG CCCGCCAAGG AAAGCGAGTG GGTGAAGATC
AATGACAAAT ATGTGCGATT CCAGAAGGTC AATGGCCAGA TAATGGATAT CGTGCCGGTG
AAAAAATAA
 
Protein sequence
MNSKSLIACM TLLGCFCAVT LPVHAAEAPE PKVTESKDNV HELEVGSRVP EKYRRSDLEV 
KDWKSKGLEA PAKESEWVKI NDKYVRFQKV NGQIMDIVPV KK