| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2475 |
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| Symbol | |
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| ID | 1184127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2733477 |
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| End bp | 2735273 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393848 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_792287 |
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| Protein GI | 28869668 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0390427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGT TAAAGGCCTT ATACGAGTCA GTCGAAAAGC AGTTCTTCGA CACACTGACC
AAAAAGCTCT CAAGCCTTTT TCTGCTGGTG CTGGTCAGCG CTCTGCTGTA CTGGGTGGCC
TTGAACATTC GCGCCGACAT CATGCTGCAA TTACACGGCT CATCACTGGA CGCCGCCGCG
CTGGGTCAGA TTCAGGGCCG GCTTGATGTC CTCAGCAACG CCATCCTGCT AAGCACGCTG
TTTACGCTGG CCATGGTCAG CTTCATGGTC TGGTATTTCC GCCATCTGAT CGTGCGCCCT
GTCATGTTCA TGACGCGTGC TCTCGAAGAG GTCGCCAGTG GCGAGGGCGA TCTGTCCCGA
GACCTGCCCT TGCTGACCCA CGACGAAATT CGCGTGCTGG CCAGCACCTG CAATCGCTTT
CTGGCCAAGC AGCGCGAGGT CATCAGCAGT ATTCAGGGGC TGACTGTGCA GATCGCAGTC
GAATCGGCAC GCTCGCTGAA AAACATCAGT GATTCCAGTG ACAGCGCCAC CGATCAGGCG
CGTTTTGCCA GGGAAGTCAT GGACCAGAGC AACATGGCCG TGGGCAGCAT CGAAGATGTT
TCGCAACAGA CTCAGGGTAT CTCCAGCACC ACTGCGCAGA ACCTGAGCAT GGCACGCGAC
TCGTACGCCG AACTGCTGGA AGTGACCGGT AACATCAGTC AGATATCCAG CAACCTCAAT
GAGTTCGGTA CGCTGGTGTC GGGGTTGAAC GAGCGTTCAT CGAGCATCAA ATCCATCGTC
GGGCTGATCC AGCAGATTTC TTCGCAAACC AACCTGCTGG CGCTCAATGC CGCCATCGAA
GCGGCGCGAG CCGGGGAGAG CGGGCGCGGG TTTGCCGTAG TGGCGGACGA GGTGCGCACC
CTGGCGCAGA ACGTCAGTAA AGCGACTGAC GATATTTCCC GGAACATCGA TGCGATGCTT
CAGGAAGTCA GCTCCACTCA CGAACAGACC ATCCAGATCA GCCACAGCGC TCGGGAAACC
CAACGGGTGG TAGAGCGTGC ATCCGGCCAT TTCGAGAGCA TGATCGGTGA TTTCGAGTCG
ACCAATGACA AGCTGGCCGA CATTGCCACG CATATCCAGC AATTTGCGAC GACCAACACC
GGCATCAACG AGCGGGTAAC GCGCATCTAC TCCGACAGCC AGGCGATCGA TCAGCGCATG
CAGCACTCCG CGACCGCAAC CCGTGACCTG TCCGGTGTCG CCGAGCAGGT TCAGGCCCTG
CTGGGGCGTT TCGTGCTTGG GCATGGCGAA CTGGACGCTG CGATCACTCG CGCCAGCCAG
TGCCGGGATA TTTTGCAGGT ACGCCTGGCG GAACTGCACA AACAAGGCGT CAACCTGTTC
GATCAGAGCT ACAAGCTGAT TCCCGGCACC GACCCTAAAC AATACACGAC CAGCTACACC
GACCGTTTCG CGCAGATCTG CCAGGAAGAA TGCGACAAGC TGACCAAAGG CACGCGGGGC
GGCAAAGTCA CGTTTATCGT CGACAGCAAA GGTTATTGCC CGGTCAACAA CAGTTGGGTG
TCACTGAAAC CGACCGGCGA CCGCGCCATC GACCTGCCCG TGTGCCGCAA CAAACGGATG
TTCTCCGACC CCATAGGTTT GCGTGCCGCC AGTAACAAAC AACGCTTCCT GCTACAGACC
TACTTGCGTG ACACCGGCGA GATCATGACC GAAATCGACG TGCCGTTTTT CTTTGAAGGA
CGCCACTGGG GCAACTTGCG GATGGGTTTC GATGCGGCGC TGCTGTTGGG CAAATAG
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| Protein sequence | MQTLKALYES VEKQFFDTLT KKLSSLFLLV LVSALLYWVA LNIRADIMLQ LHGSSLDAAA
LGQIQGRLDV LSNAILLSTL FTLAMVSFMV WYFRHLIVRP VMFMTRALEE VASGEGDLSR
DLPLLTHDEI RVLASTCNRF LAKQREVISS IQGLTVQIAV ESARSLKNIS DSSDSATDQA
RFAREVMDQS NMAVGSIEDV SQQTQGISST TAQNLSMARD SYAELLEVTG NISQISSNLN
EFGTLVSGLN ERSSSIKSIV GLIQQISSQT NLLALNAAIE AARAGESGRG FAVVADEVRT
LAQNVSKATD DISRNIDAML QEVSSTHEQT IQISHSARET QRVVERASGH FESMIGDFES
TNDKLADIAT HIQQFATTNT GINERVTRIY SDSQAIDQRM QHSATATRDL SGVAEQVQAL
LGRFVLGHGE LDAAITRASQ CRDILQVRLA ELHKQGVNLF DQSYKLIPGT DPKQYTTSYT
DRFAQICQEE CDKLTKGTRG GKVTFIVDSK GYCPVNNSWV SLKPTGDRAI DLPVCRNKRM
FSDPIGLRAA SNKQRFLLQT YLRDTGEIMT EIDVPFFFEG RHWGNLRMGF DAALLLGK
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