| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2467 |
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| Symbol | |
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| ID | 1184119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2724717 |
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| End bp | 2725970 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393840 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_792279 |
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| Protein GI | 28869660 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCAGTC ATGCAGATCG CCGCAACGCC CTTTCACTGG ACAGCCTTAA TTTTTTCCTC
GCCGATGTGC GCGATGGTTT GGGTCCTTAC CTGGCGATCT ACCTGCTGGC GGTCCATCAA
TGGGACCCGG CCAGTATCGG CGTGGTCATG ACCATCGCGG GTATCGCCGG GCTGCTGACC
CAGACGCCCG CAGGTGCTCT GATCGACCGC ACACCCTACA AGCGCGGGAT CATCGGTGTG
GCGGCGCTGC TGGTGACGTT GAGCTGTCTG ATTCTGCCTT TCACCTCTTC ATTTACCCTG
GTTGCCATCA CCCAGGCGCT GAGCAGCGTC GCCGCTTCGG TGTTCGCACC AGCCATTGCT
GCGATTTCGC TGGGCATTAC CGGACCGAAA GCGTTCACCC GACGCACCGG GCGCAATGAA
ACCTTCAATC ATGCGGGCAA CGCCTGTGCG GCCCTGCTGG CAGGCGGCTT CGCTTACCTG
TTCGGCCCGA TTGCGGTGTT CTATCTGATG GCCGCAATGG CCTTGGCGAG CGTTGTCGCG
ATCAGTTTTG TGTCTGCCGA TGCCATTGAT CATGACGTGG CCAGAGGCTT TGATGCATCG
CATACCTCAC ATGGCAGTCA GCCTTCCGGT CTGTCCGCAT TACTGAACAA CAGAACCCTG
CTGCTGTTCG GGATTTGCTG CGCACTCTTT CATCTGGCCA ACGCAGCGAT GCTGCCACTG
GTGAGTCAGA AGCTTTCGCA AATCAACATG CAGATGGCGA CTCCGCTGAC CTCGGCCTGC
ATCGTCGCGG CGCAACTGGT GATGGTGCCG GCGGCGCTGC TGGTGGGTAT GAAGGCCGAT
GTCTGGGGAC GCAAACCGCT GCTGCTGGCC GGTTTCCTGA TTCTTCCGAT CCGCGGCGTG
CTGTATACGC TGTCCGATGA TCCGTACTGG CTGGTGGCCG TGCAGATGCT CGACGGCATC
GGCGCGGGCC TGTTTGGCGC ACTGTTCCCG TTGATGGTCA AAGACCTGAC TCAGGGCAGC
GGCCGTTTCA ATGTGAGCCT TGGGGCGCTG TCGACCCTGT TTGGCCTGGG CGCGGCGCTG
AGCAACAGCC TGGCCGGTTT CGTGGTGCAT GCGGCCGGGT ACAGCGCAGC ATTTCTGACC
CTTGCGGCGG TGGCGGCAGT GGCGTTCTGT TTGCTGCTGG TGGCGGTGCC GGAGACGCTT
TCGCGGTCGG ATCATGCGCC TGAGCTCAAG CCGGATCATG CCGTGAATAC GTGA
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| Protein sequence | MASHADRRNA LSLDSLNFFL ADVRDGLGPY LAIYLLAVHQ WDPASIGVVM TIAGIAGLLT
QTPAGALIDR TPYKRGIIGV AALLVTLSCL ILPFTSSFTL VAITQALSSV AASVFAPAIA
AISLGITGPK AFTRRTGRNE TFNHAGNACA ALLAGGFAYL FGPIAVFYLM AAMALASVVA
ISFVSADAID HDVARGFDAS HTSHGSQPSG LSALLNNRTL LLFGICCALF HLANAAMLPL
VSQKLSQINM QMATPLTSAC IVAAQLVMVP AALLVGMKAD VWGRKPLLLA GFLILPIRGV
LYTLSDDPYW LVAVQMLDGI GAGLFGALFP LMVKDLTQGS GRFNVSLGAL STLFGLGAAL
SNSLAGFVVH AAGYSAAFLT LAAVAAVAFC LLLVAVPETL SRSDHAPELK PDHAVNT
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