| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2386 |
|---|
| Symbol | |
|---|
| ID | 1184038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2635219 |
|---|
| End bp | 2636106 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637393763 |
|---|
| Product | C-5 cytosine-specific DNA methylase family protein |
|---|
| Protein accession | NP_792202 |
|---|
| Protein GI | 28869583 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0340074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAG CAATCGATTT GTTCGCCGGT CTCGGCGGAT GGAGTAATGG CGCGCGCAGG
GCTGGCGTCA AAGTCCTTTG GGCGGCCAAC CACTGGCCGG TCGCGGTCGG ATGGCACAGC
GCCAACCACC CAGACGCGAT TCATGTCTGC CAAGACCTGC ACCAAGCTGA TTGGTCGAAA
GTGCCGGCCC ACGGCATCAT GCTGGCCTCG CCATGCTGCC AGGGTCATTC GAAGGCGCGC
GGCAAGAAGT CAGGTAATGC TCAGCACGAT TCGTCACGGT CGACTGCATG GGCAGTGGTT
TCTGCTGCCG AGTACCACAG CCCCGAAGTG GTGCTGGTCG AAAACGTCGA AGAGTTCACC
GACTGGGCGC TCTATCCGGC TTGGTCTCAA GCTATGGCAG CGCTGGGCTA TATGATCGCG
CCGCACGTCG TGGATTGCGC AGACCTCGGC GTGCCTCAGC ACCGGGTCAG GCTGTTCCTT
GTCTGCACGC GCAGCAAGGC ACCGCTCAAC CTGCAACTGC ATCAGCGCCA GCACGTACCC
GCCTCGTCTT TCATAGACTT TGACTCCGGA AAATGGTCGC CCATCGTCAA GCCTAGCCGC
GCCGAATCGA CGCTGACGCG AGTCAAGAAC GGCCGCCAGC GATTTGGTGA GCGTTTCATC
ATGCCGTATT ACAGGTCTGG CTCCGGGCTG ACCGGAAGCT GCATCGAGCG CCCCATCGGA
ACCATCACGA AGCTTGATCG CTGGGCGCTC GTACGCGGCA ACGAAATGCG AATGCTGTCA
GCCGACGAGG GCTTGGCTGG CATGTCGTTC GATGCGGATA CAAAACGGCC GGCAAGCCAT
CGACTAACCA TGCACATGGC TGGTACCAGC ACGAATCCTG TTGGATAA
|
|---|
| Protein sequence | MPTAIDLFAG LGGWSNGARR AGVKVLWAAN HWPVAVGWHS ANHPDAIHVC QDLHQADWSK
VPAHGIMLAS PCCQGHSKAR GKKSGNAQHD SSRSTAWAVV SAAEYHSPEV VLVENVEEFT
DWALYPAWSQ AMAALGYMIA PHVVDCADLG VPQHRVRLFL VCTRSKAPLN LQLHQRQHVP
ASSFIDFDSG KWSPIVKPSR AESTLTRVKN GRQRFGERFI MPYYRSGSGL TGSCIERPIG
TITKLDRWAL VRGNEMRMLS ADEGLAGMSF DADTKRPASH RLTMHMAGTS TNPVG
|
|---|
| |