| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2319 |
|---|
| Symbol | |
|---|
| ID | 1183970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2569753 |
|---|
| End bp | 2570166 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637393698 |
|---|
| Product | resolvase, putative |
|---|
| Protein accession | NP_792138 |
|---|
| Protein GI | 28869519 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000512602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATT GGGCACGCGC AGGAGATGTT GTTCATGTGC ATTCGATTGA CCGTCTAGCA
CGCTCTATGG CTGACCTCCT CAAGATCGTT GCCGACTTCA ACGCAAAGGG CGTACATGTC
CACTTCCATA AAGAATCTAT GGTGTTCACT GGTGACGACT CACCCATGCA GAAACTCATG
TTGAACATGA TGGGCAGCTT TGCCCAATTT GAAAGAGAGG TGATGAAGGA GCGCCAGCGG
GAAGGTATCG CGAAGGCCAA GGAGAAAGGA GTTTACAAAG GTCGAGTGAA GACCGTGGAT
GATGCTGCGA TCCTGGCCCT GCTGAGTGCT GGTAAGTCTG TCCGTGTTGT CGCCGCTGAA
CTCGGCGTCA ACCCCTCCAC AGTTCAACGT GCAAAAAATG CCTCAAAAGG TTGA
|
|---|
| Protein sequence | MIDWARAGDV VHVHSIDRLA RSMADLLKIV ADFNAKGVHV HFHKESMVFT GDDSPMQKLM
LNMMGSFAQF EREVMKERQR EGIAKAKEKG VYKGRVKTVD DAAILALLSA GKSVRVVAAE
LGVNPSTVQR AKNASKG
|
|---|
| |