Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2235 |
Symbol | |
ID | 1183886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2469471 |
End bp | 2470577 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637393616 |
Product | hypothetical protein |
Protein accession | NP_792056 |
Protein GI | 28869437 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.323818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACAGCC CTTTCCTGTT CGACCTGATT GCACGGTTGA AAGCCGAATC ATCGGACGCA GATCTGGACG CTCATAAATC CAGGATCCGG GAAGCATTCC AGCATACGCT CACGCCTTAC CTGTCGGTCA CGTCGCTTAT CCATGAGCAT ATTCATCTGA ATTACAATCA GACCATTGTT GCTGATGTGC TCCGTGCGCC CAGAGATATC GCCGTGTTCG GTCGTATCAA CCCTCTGAGG GCCGATTTTT CTATTAGCCC CGTCGAGCAG GTGATGGTTT CCGGCAGCAC CCACAAATTT GTCCTGGCAC CGGCAGGTAC GAATGTTAAG TGGGATGTTG AGTGTTTGCA GGGCAATCCT GAGGATTATG GCGCTATTAA TGGGACGGGC GTTTATTACG CTCCGACATT GCCAGGCGAT ACGTCCTTCA ACCGGATGCG CGTCACTGCC ACTCATGACA CGTCGGGCGT TGTCAGTTCG GCGCTTGTCA CGGTAGTGGC CAGCTACGCC ACTCTCAACC CCCTGATTCA GATCTGCGAG GTGACCCGAA CGGCGGAACT GGCGGCGGGG GAAGTGAATC GTGGCCAATT ACTCTGGTCG CTCAAAGAGA CCGTGATTGG CGAAGGCGGC GACTTGCGCC CCAGTGCACT GCCCGATGGT GATCATACCT ATGTTCCCCG CAGACCCGCG TTGCACGATA AAACCTACGT GCTGGACGAG ATCATCGTCA CCGGCAAGAG CAACCCCCAG GCCCATGCTT CTGCCTGGGT ATTGGTCACG CAAAAGATCC CTTTCCTGAC CATCAAGCTC GCAGCGTCTG CGCAGGTAGC TGCCGGTCAG GTGCAACTGC AGGCGTTCGC CAATGGCAAC CCTCTCGACC CGGCGTTGTT CAAGGTCTAT TGGGACATTG GCGCGAAGCT CACCGGGGAA ATCAGTGAGA CCGGGCTCTA TAGCGTCGCG CAGAACACGA CCGACAGATT CGTGCTGATT TTTGCCTGGG CCATGCACCC CCTTTTTGGA AAGCTGGAGG GGCATATCAT CCTTCCGTTA CCACTGGGCC GGTTTGCCCA GGAGTTGGGC ATGATGAGCG ACAAGACAGC ACCCTGA
|
Protein sequence | MNSPFLFDLI ARLKAESSDA DLDAHKSRIR EAFQHTLTPY LSVTSLIHEH IHLNYNQTIV ADVLRAPRDI AVFGRINPLR ADFSISPVEQ VMVSGSTHKF VLAPAGTNVK WDVECLQGNP EDYGAINGTG VYYAPTLPGD TSFNRMRVTA THDTSGVVSS ALVTVVASYA TLNPLIQICE VTRTAELAAG EVNRGQLLWS LKETVIGEGG DLRPSALPDG DHTYVPRRPA LHDKTYVLDE IIVTGKSNPQ AHASAWVLVT QKIPFLTIKL AASAQVAAGQ VQLQAFANGN PLDPALFKVY WDIGAKLTGE ISETGLYSVA QNTTDRFVLI FAWAMHPLFG KLEGHIILPL PLGRFAQELG MMSDKTAP
|
| |