Gene PSPTO_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2235 
Symbol 
ID1183886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2469471 
End bp2470577 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content56% 
IMG OID637393616 
Producthypothetical protein 
Protein accessionNP_792056 
Protein GI28869437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.323818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAGCC CTTTCCTGTT CGACCTGATT GCACGGTTGA AAGCCGAATC ATCGGACGCA 
GATCTGGACG CTCATAAATC CAGGATCCGG GAAGCATTCC AGCATACGCT CACGCCTTAC
CTGTCGGTCA CGTCGCTTAT CCATGAGCAT ATTCATCTGA ATTACAATCA GACCATTGTT
GCTGATGTGC TCCGTGCGCC CAGAGATATC GCCGTGTTCG GTCGTATCAA CCCTCTGAGG
GCCGATTTTT CTATTAGCCC CGTCGAGCAG GTGATGGTTT CCGGCAGCAC CCACAAATTT
GTCCTGGCAC CGGCAGGTAC GAATGTTAAG TGGGATGTTG AGTGTTTGCA GGGCAATCCT
GAGGATTATG GCGCTATTAA TGGGACGGGC GTTTATTACG CTCCGACATT GCCAGGCGAT
ACGTCCTTCA ACCGGATGCG CGTCACTGCC ACTCATGACA CGTCGGGCGT TGTCAGTTCG
GCGCTTGTCA CGGTAGTGGC CAGCTACGCC ACTCTCAACC CCCTGATTCA GATCTGCGAG
GTGACCCGAA CGGCGGAACT GGCGGCGGGG GAAGTGAATC GTGGCCAATT ACTCTGGTCG
CTCAAAGAGA CCGTGATTGG CGAAGGCGGC GACTTGCGCC CCAGTGCACT GCCCGATGGT
GATCATACCT ATGTTCCCCG CAGACCCGCG TTGCACGATA AAACCTACGT GCTGGACGAG
ATCATCGTCA CCGGCAAGAG CAACCCCCAG GCCCATGCTT CTGCCTGGGT ATTGGTCACG
CAAAAGATCC CTTTCCTGAC CATCAAGCTC GCAGCGTCTG CGCAGGTAGC TGCCGGTCAG
GTGCAACTGC AGGCGTTCGC CAATGGCAAC CCTCTCGACC CGGCGTTGTT CAAGGTCTAT
TGGGACATTG GCGCGAAGCT CACCGGGGAA ATCAGTGAGA CCGGGCTCTA TAGCGTCGCG
CAGAACACGA CCGACAGATT CGTGCTGATT TTTGCCTGGG CCATGCACCC CCTTTTTGGA
AAGCTGGAGG GGCATATCAT CCTTCCGTTA CCACTGGGCC GGTTTGCCCA GGAGTTGGGC
ATGATGAGCG ACAAGACAGC ACCCTGA
 
Protein sequence
MNSPFLFDLI ARLKAESSDA DLDAHKSRIR EAFQHTLTPY LSVTSLIHEH IHLNYNQTIV 
ADVLRAPRDI AVFGRINPLR ADFSISPVEQ VMVSGSTHKF VLAPAGTNVK WDVECLQGNP
EDYGAINGTG VYYAPTLPGD TSFNRMRVTA THDTSGVVSS ALVTVVASYA TLNPLIQICE
VTRTAELAAG EVNRGQLLWS LKETVIGEGG DLRPSALPDG DHTYVPRRPA LHDKTYVLDE
IIVTGKSNPQ AHASAWVLVT QKIPFLTIKL AASAQVAAGQ VQLQAFANGN PLDPALFKVY
WDIGAKLTGE ISETGLYSVA QNTTDRFVLI FAWAMHPLFG KLEGHIILPL PLGRFAQELG
MMSDKTAP