Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2181 |
Symbol | |
ID | 1183832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2401837 |
End bp | 2402646 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393563 |
Product | transcriptional regulator, IclR family |
Protein accession | NP_792003 |
Protein GI | 28869384 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.169308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAACG ATTCGATCAT CCCTGAAAAA ATCACTGGCA AAGAACCGGC GCCAAGCGGA ACCCAGACCC TGTTGCGCGG CCTTGGCGTG GTTCAGGCGG TGGCCAGTGG CGCACGGGAC CTGAAAGAGA TCGCCCGGCT GATCGGCACC ACGCGCAGCA CTACTCACCG GCTGGCCAGT TGCCTGGTCG AGGAGCGCTA CCTTCGGGTG GTGCCGCAAG TGGGTTATTT GCTGGGGCCG AAGCTGATCG AGCTGGGTTT TCAGGCGCGC GAAGAAGTGC CGCTGGCCAT TCTCGCCCGC CCGTATCTGG ATAGGCTGTC GGAACTGACC GGCGATACGG TGCATCTGGC GGTTCGGGAG GGTGACGACG TGCTGTACCT GCACAAGAAC CCTGGTCGCA ATGGGCCGGA AATGCGTTCA CGGGTCGGGC ACCGCATGCC GCTGGTGCGC ACCGGTATCG GTAAGGCGTT GTTGCTGGAC AGTACGCAAG CGGAGTGGCA GCGACTGTAC GAGGTCAGCA CGCCGGCGTC AGGCAGAAAC CCGCTGTGGC CTGCTCATGA GCAACAAACC TGGGAACAGC TTAAAGCGCG AAGGGAGGAG TACGTGCAGG GCGGTTATGC GTTTGACCTG GAGGACAACG AACCGTCGAT TCGTTGTGTT GCAGCGCCGG TACGGGATGC CAGCAAACAG ATTGTTGCTG GCATCAGTGT TGCCAGTACC GTGCCTTACA TGCCGCTGGA GAAAATGGCC GAGCTGGTTC CGCTGATCAA ACAGATAGCA GCGGAACTTT CGGCCGATCT CGGCGGCTGA
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Protein sequence | MHNDSIIPEK ITGKEPAPSG TQTLLRGLGV VQAVASGARD LKEIARLIGT TRSTTHRLAS CLVEERYLRV VPQVGYLLGP KLIELGFQAR EEVPLAILAR PYLDRLSELT GDTVHLAVRE GDDVLYLHKN PGRNGPEMRS RVGHRMPLVR TGIGKALLLD STQAEWQRLY EVSTPASGRN PLWPAHEQQT WEQLKARREE YVQGGYAFDL EDNEPSIRCV AAPVRDASKQ IVAGISVAST VPYMPLEKMA ELVPLIKQIA AELSADLGG
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