Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2170 |
Symbol | |
ID | 1183821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2388952 |
End bp | 2389395 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637393552 |
Product | heat shock protein, Hsp20 family |
Protein accession | NP_791992 |
Protein GI | 28869373 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.245471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACTG CATTTTCACT GGCTCCACTC TTTCGTCATT CCGTGGGTTT CGACCGCTTC AACGACCTTT TCGAGTCGGC GGCGCGAAAT GAGACAGCCA GCGGTTACCC TCCTTACAAC GTGGAGCGGC ATACCGATGA TCATTACCGC ATCGTGATCG CTGCAGCAGG CATGCAAGAG CAGGATCTCG AGTTGCAAGT CGAGAAGGGT GTATTGACCG TCATCGGCAA CAAGCGTGAG CAAGAAGCTG ATAACGTAAC GTATCTGCAT CAGGGTATTG CCCGGCGTGA ATTCAAGCTG TCGTTCAGGC TGGCGGACAA TATTGAAGTC AAAGGGGCCG ATCTTTCTCA TGGCCTGCTG AACATCGACC TGGTGCGCAA CGTGCCGGAA GAAGCGAAAC CAAAGCGTAT TCCGCTCAAT ACTCAGAAAG TACTGAACAG CTGA
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Protein sequence | MATAFSLAPL FRHSVGFDRF NDLFESAARN ETASGYPPYN VERHTDDHYR IVIAAAGMQE QDLELQVEKG VLTVIGNKRE QEADNVTYLH QGIARREFKL SFRLADNIEV KGADLSHGLL NIDLVRNVPE EAKPKRIPLN TQKVLNS
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