Gene PSPTO_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2170 
Symbol 
ID1183821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2388952 
End bp2389395 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content53% 
IMG OID637393552 
Productheat shock protein, Hsp20 family 
Protein accessionNP_791992 
Protein GI28869373 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.245471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTG CATTTTCACT GGCTCCACTC TTTCGTCATT CCGTGGGTTT CGACCGCTTC 
AACGACCTTT TCGAGTCGGC GGCGCGAAAT GAGACAGCCA GCGGTTACCC TCCTTACAAC
GTGGAGCGGC ATACCGATGA TCATTACCGC ATCGTGATCG CTGCAGCAGG CATGCAAGAG
CAGGATCTCG AGTTGCAAGT CGAGAAGGGT GTATTGACCG TCATCGGCAA CAAGCGTGAG
CAAGAAGCTG ATAACGTAAC GTATCTGCAT CAGGGTATTG CCCGGCGTGA ATTCAAGCTG
TCGTTCAGGC TGGCGGACAA TATTGAAGTC AAAGGGGCCG ATCTTTCTCA TGGCCTGCTG
AACATCGACC TGGTGCGCAA CGTGCCGGAA GAAGCGAAAC CAAAGCGTAT TCCGCTCAAT
ACTCAGAAAG TACTGAACAG CTGA
 
Protein sequence
MATAFSLAPL FRHSVGFDRF NDLFESAARN ETASGYPPYN VERHTDDHYR IVIAAAGMQE 
QDLELQVEKG VLTVIGNKRE QEADNVTYLH QGIARREFKL SFRLADNIEV KGADLSHGLL
NIDLVRNVPE EAKPKRIPLN TQKVLNS