| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2128 |
|---|
| Symbol | |
|---|
| ID | 1183775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2300687 |
|---|
| End bp | 2301151 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637393506 |
|---|
| Product | response regulator |
|---|
| Protein accession | NP_791950 |
|---|
| Protein GI | 28869331 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAG ACTTTCGTAT CCTGATCATT GACGACCAGC GGCCCAACCT CGATCTGATG
GAGCAGTTGC TTGCCCGCGA GGGGTTGACC AATGTGCTGA GCAGCACCGA ACCCTTGCGC
ACGCTGGACC TGTTCAACAG CTTCGAGCCC GACCTGGTGG TGCTGGATCT GCACATGCCC
GATTTTGATG GCTTCGCGGT GCTGGAACAG CTAAACCGAC GCATCCCGGC CAATGACTAC
CTGCCGATCA TGGTGCTGAC TGCCGACGCG ACACGGGATA CGCGTCTGCG CGCCCTTGCA
TTGGGCGCGC GGGACTTCAT CAGCAAACCG CTGGATGCAC TGGAAACCAT GTTGCGCATC
TGGAACCTGC TGGAAACCCG TGCGCTGTAT AAATCGCTGC GCAAGCTGGT GCCGCCGGAA
AACATCGAGT TGCTGCGCCA GACACGCGTG CCCGCGCAGC CGTGA
|
|---|
| Protein sequence | MSGDFRILII DDQRPNLDLM EQLLAREGLT NVLSSTEPLR TLDLFNSFEP DLVVLDLHMP
DFDGFAVLEQ LNRRIPANDY LPIMVLTADA TRDTRLRALA LGARDFISKP LDALETMLRI
WNLLETRALY KSLRKLVPPE NIELLRQTRV PAQP
|
|---|
| |