Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2022 |
Symbol | |
ID | 1183667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2211013 |
End bp | 2211294 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637393400 |
Product | hypothetical protein |
Protein accession | NP_791845 |
Protein GI | 28869226 |
COG category | [S] Function unknown |
COG ID | [COG3123] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.117582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCAAGG TCAACGAGTA CTTCGACGGC ACCGTCAAAT CCATCGCCTT CAGTCAGGCC GAAGGTCAGG CAACTATTGG TGTGATGGCA GCGGGAGAAT ATGAGTTCGG CACTGCACAG CGGGAAATCA TGCATGTGAT CTCTGGCGAA TTGAACGTCA AACTCCCGGA CAGCACCGAC TGGGAAACTT TCTCCACCGG CAGCCAGTTC AATGTACCCG CCAACAGCAA GTTTCAGCTC AAAGTCAGCG TCGATACCGC GTACCTGTGC GAGTACCGCT GA
|
Protein sequence | MFKVNEYFDG TVKSIAFSQA EGQATIGVMA AGEYEFGTAQ REIMHVISGE LNVKLPDSTD WETFSTGSQF NVPANSKFQL KVSVDTAYLC EYR
|
| |