Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2015 |
Symbol | |
ID | 1183660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2202040 |
End bp | 2202840 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637393393 |
Product | CAAX amino terminal protease family protein |
Protein accession | NP_791838 |
Protein GI | 28869219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCA TGACTACAAG ACACTGGATG GTTCTCTTTC TCCTGAGCAC TGGTTATGCA CTTGCATTGT CTTATGGCAG TATCGCCCCC GCTGCGGCCT TAAGCATCGG CCTGTTGCTC GTCGCGTGGT TATGCGTGGC GTTGCCTTCT GATAAATACA TCCGTTTTTT TGGCCATGTG CTGTTTGTTG TGACGGGCCT GGCCTTGGCT TTTCATCTGG CACCCGGTTT CAATAATGCG CAAGTCATCG AAGCCACCCG ATTCAGTGCC GATGCCCAGA TTTTTTCCAT GTACCTGAAT CTGGACAAGC CGCTCATCGG CTTCTGGCTG ATACTGGCCT GCCCGTGGAT CATGCCGAAG GTCGACATCG CCCATTCGCT GAAAGTCGGC GTTCTCGCGC TGATCGTCAC GTCAGCGTTC TGCATGACAG CAGCCGTCGT TCTCAACGTT GTCGGCTGGA CACCCAAATG GCCCGCTCAA GGCCTGATAT GGCTGTTCAA CAACCTGTTG CTGGTGACCC TCGCCGAGGA GCTGTTTTTC CGCGCGTATC TGCAAGGCGG TCTGCAGCGC CTGTTCAAGG ATTCGAGGTT TGCGACCGCA CTGTCGGTCA CTCTCGCTGC GGGCATGTTC GGGCTCGCTC ACGCAGGCGC AGGCTGGGAG TGGATGGTGT TGGCGAGCAT GGCAGGTGTG GGTTATGGCA TCGCGTTTCG TTCAGGTGGC TTGCCAGCTG CGGTCATCAG TCATTTTGGC CTGAATCTTG TGCACTTCGG GCTGTTCACC TATCCCATGC TTGCCCGGTA A
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Protein sequence | MSLMTTRHWM VLFLLSTGYA LALSYGSIAP AAALSIGLLL VAWLCVALPS DKYIRFFGHV LFVVTGLALA FHLAPGFNNA QVIEATRFSA DAQIFSMYLN LDKPLIGFWL ILACPWIMPK VDIAHSLKVG VLALIVTSAF CMTAAVVLNV VGWTPKWPAQ GLIWLFNNLL LVTLAEELFF RAYLQGGLQR LFKDSRFATA LSVTLAAGMF GLAHAGAGWE WMVLASMAGV GYGIAFRSGG LPAAVISHFG LNLVHFGLFT YPMLAR
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